DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32085 and AT5G51380

DIOPT Version :10

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_199951.1 Gene:AT5G51380 / 835212 AraportID:AT5G51380 Length:479 Species:Arabidopsis thaliana


Alignment Length:449 Identity:104/449 - (23%)
Similarity:160/449 - (35%) Gaps:139/449 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 LMLDDRFLSRFFQYFSPYERRILAQVCIKWRDTLYRSPRY-----WSGLL--------PTLQCRE 334
            |.|.|..|.:..:.....:...::.||.:|.....|..|.     |..||        |.|...:
plant    65 LSLSDSLLLKILEKLPESQNEDVSLVCKRWLSVQGRRLRSMKVFDWEFLLSGRLVSRFPKLTSVD 129

  Fly   335 LRQM---PGCDRGKLY--------------------------NSLIRRGFHALGLVGASDEDALD 370
            |...   |..:.|.|.                          |.::.:|...||. |:.|...|.
plant   130 LVNACFNPSSNSGILLCHTSISFHVSTDSSLNLNFVEESLLDNEMVDKGLRVLGR-GSFDLIKLV 193

  Fly   371 VVHSFPLASKHVHSLSLRCSSISDRGLETLLDHL-------QSLFELELAG------CNEVTEAG 422
            |:::..|.   :.||:..||.:.:..|....|:|       ::|..|.|.|      .:.|::.|
plant   194 VINATELG---LLSLAEDCSDLQELELHKCSDNLLRGIAACENLRGLRLVGSVDGLYSSSVSDIG 255

  Fly   423 L----WACLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQAYHVTD---AALGYFSPKQS 480
            |    ..|  .|:|.|.|:.|....| .:.|:.|....|.|.|:..:.:.|   |||.||     
plant   256 LTILAQGC--KRLVKLELSGCEGSFD-GIKAIGQCCEVLEELSICDHRMDDGWIAALSYF----- 312

  Fly   481 HSLSILRLQSCWEL-TNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAENLQKLRALDLSWCP 544
            .||..|.:.||.:: ::.|...::.|.|.|..|.|..|.....:|          :|||      
plant   313 ESLKTLLISSCRKIDSSPGPGKLLGSCPALESLQLRRCCLNDKEG----------MRAL------ 361

  Fly   545 RITDASLEYIACDLNQLEELTLDRCVHITDIGVGYISTMLSLTALFLRWCSQVRDFGLQHLCSMR 609
                    :..||                           .:|.:.::.|..:.|.......:.|
plant   362 --------FKVCD---------------------------GVTKVNIQDCWGLDDDSFSLAKAFR 391

  Fly   610 NLQVLSLAGCPLLTSSGLSSLIQLRHLQELE---LTNC--------PGASHELFDYLKE 657
            .::.|||.||.:||:|||.|:|  .|.:|||   :.:|        ..|...||..|||
plant   392 RVRFLSLEGCSILTTSGLESVI--LHWEELESMRVVSCKNIKDSEISAALSSLFSLLKE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 10/46 (22%)
leucine-rich repeat 382..406 CDD:275381 7/30 (23%)
AMN1 383..600 CDD:187754 52/237 (22%)
leucine-rich repeat 431..456 CDD:275381 7/24 (29%)
leucine-rich repeat 457..482 CDD:275381 9/27 (33%)
leucine-rich repeat 483..508 CDD:275381 6/25 (24%)
leucine-rich repeat 509..534 CDD:275381 5/24 (21%)
leucine-rich repeat 535..560 CDD:275381 5/24 (21%)
leucine-rich repeat 561..585 CDD:275381 0/23 (0%)
leucine-rich repeat 586..610 CDD:275381 3/23 (13%)
leucine-rich repeat 636..661 CDD:275381 10/33 (30%)
AT5G51380NP_199951.1 AMN1 208..405 CDD:187754 57/255 (22%)
leucine-rich repeat 212..233 CDD:275381 3/20 (15%)
leucine-rich repeat 234..265 CDD:275381 8/32 (25%)
leucine-rich repeat 266..290 CDD:275381 7/24 (29%)
leucine-rich repeat 291..314 CDD:275381 9/27 (33%)
leucine-rich repeat 315..341 CDD:275381 6/25 (24%)
leucine-rich repeat 342..367 CDD:275381 10/75 (13%)
leucine-rich repeat 393..418 CDD:275381 13/26 (50%)
leucine-rich repeat 419..442 CDD:275381 4/22 (18%)

Return to query results.
Submit another query.