DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and Fbxl16

DIOPT Version :10

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_038942467.1 Gene:Fbxl16 / 494223 RGDID:1309127 Length:488 Species:Rattus norvegicus


Alignment Length:486 Identity:254/486 - (52%)
Similarity:335/486 - (68%) Gaps:39/486 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 IPGGGV--NPGSPTFSTMGMVAAQKAAASAGGTPLQ--LRKQLPNPHLHHPYGSMGINAASPLIM 268
            :|..|:  .||.|  :.:|..:..|...:|...|.|  ....||.|.|..|...:.: |..|.  
  Rat    15 LPRNGLVKLPGQP--NGLGAASITKGTPAAKNRPCQPPPPPTLPPPSLATPLSRVAL-AGGPC-- 74

  Fly   269 QHQLHPP---------PIHSIEQ--LMLDDRFLSRFFQYFSPYERRILAQVCIKWRDTLYRSPRY 322
                 ||         |...:|:  |..|::.|:..|.|||..|:.||||||..||..||: |::
  Rat    75 -----PPASGPASGPVPGPPVERPPLATDEKILNGLFWYFSACEKCILAQVCKAWRRVLYQ-PKF 133

  Fly   323 WSGLLPTLQCREL-RQMPGCDRGKLYN--SLIRRGFHALGLVGASDEDALDVVHSFPLASKHVHS 384
            |:||.|.|..:|| ..:||.:: :..|  ....|||....|||.||.|..:.:.::.|:.|.|.:
  Rat   134 WAGLTPVLHAKELYNVLPGGEK-EFVNLQGFAARGFEGFCLVGVSDLDICEFIDNYSLSKKGVKA 197

  Fly   385 LSLRCSSISDRGLETLLDHLQSLFELELAGCNEVTEAGLWACLTPRIVSLSLADCINIADEAVGA 449
            :||:.|:|:|.|||.:|:.:|.:..|||:|||:.||||||:.|:.||.|||::||||:||:|:.|
  Rat   198 MSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIAA 262

  Fly   450 VAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSL 514
            ::||||:|.|.|||||||||.||.||:.:|.||...|||.||||:||||:||:|||||:||.|||
  Rat   263 ISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSL 327

  Fly   515 SGCSKLTDDGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTLDRCVH-------- 571
            |||||:|||||||:||||:|||:|||||||||||.:|||:||||::||||.||||.|        
  Rat   328 SGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCTHPYTPGWCV 392

  Fly   572 -ITDIGVGYISTMLSLTALFLRWCSQVRDFGLQHLCSMRNLQVLSLAGCPLLTSSGLSSLIQLRH 635
             |||.|:.|:|||.||.:|:||||.||:||||:||.:||:|::||||||||||::|||.|:||:.
  Rat   393 RITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPLLTTTGLSGLVQLQE 457

  Fly   636 LQELELTNCPGASHELFDYLKEHLPRCLIIE 666
            |:||||||||||:.|||.|..:||||||:||
  Rat   458 LEELELTNCPGATPELFKYFSQHLPRCLVIE 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 20/41 (49%)
leucine-rich repeat 382..406 CDD:275381 10/23 (43%)
AMN1 383..600 CDD:187754 144/225 (64%)
leucine-rich repeat 431..456 CDD:275381 15/24 (63%)
leucine-rich repeat 457..482 CDD:275381 16/24 (67%)
leucine-rich repeat 483..508 CDD:275381 17/24 (71%)
leucine-rich repeat 509..534 CDD:275381 21/24 (88%)
leucine-rich repeat 535..560 CDD:275381 20/24 (83%)
leucine-rich repeat 561..585 CDD:275381 17/32 (53%)
leucine-rich repeat 586..610 CDD:275381 15/23 (65%)
leucine-rich repeat 636..661 CDD:275381 17/24 (71%)
Fbxl16XP_038942467.1 F-box_FBXL16 95..136 CDD:438899 20/41 (49%)
leucine-rich repeat 195..219 CDD:275381 10/23 (43%)
AMN1 201..422 CDD:187754 142/220 (65%)
leucine-rich repeat 220..243 CDD:275381 13/22 (59%)
leucine-rich repeat 244..269 CDD:275381 15/24 (63%)
leucine-rich repeat 270..321 CDD:275381 35/50 (70%)
leucine-rich repeat 322..347 CDD:275381 21/24 (88%)
leucine-rich repeat 348..373 CDD:275381 20/24 (83%)
leucine-rich repeat 374..407 CDD:275381 17/32 (53%)
leucine-rich repeat 408..427 CDD:275381 12/18 (67%)

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