DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32085 and pof2

DIOPT Version :10

Sequence 1:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_596079.1 Gene:pof2 / 2540355 PomBaseID:SPBC25B2.11 Length:463 Species:Schizosaccharomyces pombe


Alignment Length:414 Identity:92/414 - (22%)
Similarity:158/414 - (38%) Gaps:128/414 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 YFSPYERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLIRRGFHALGL 360
            |....|.|..:.||..||:.          ::|||..:.:.|    :..:|.|.     |..|  
pombe    14 YLEADELRCKSTVCTSWRNF----------IIPTLWEKVVFQ----NEAQLNNF-----FDTL-- 57

  Fly   361 VGASDEDALDVVHSFPLASKHVHSLSLRCSSI----SDRGLETLLDHLQSLFELELAGCNEVTEA 421
                 :.:.||.:.|....|      |.||.:    :|:.| .|:.....:..|.|:||..::| 
pombe    58 -----QYSKDVSYYFRYLRK------LNCSRVRKFLTDKHL-MLMTLATGISRLNLSGCTRISE- 109

  Fly   422 GLWACLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHSLSIL 486
                   |.|..| |...:|:.......:..|..::.|:      ::|         ...:|..|
pombe   110 -------PLIGKL-LYQNLNLVTINFSNIFSLPANILEY------ISD---------NCPNLKAL 151

  Fly   487 RLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSKLTDDGVELIAE--------------------- 530
            .:.:|..:.:.|:|.|:...|:|..|.:..|.||||..:::::|                     
pombe   152 NIGNCGLVEDTGMVQIIKRCPYLNRLIIPNCRKLTDVSLQILSEKEDLIELDISGCEGFHNADTL 216

  Fly   531 --------------------------------NLQKLRALDLSWCPRITDASLEYIACDLNQLEE 563
                                            .|..:|||.|:..|.:.|:.:|.|.|..::|..
pombe   217 SRLVSRNRGLKELSMDGCTELSHFITFLNLNCELDAMRALSLNNLPDLKDSDIELITCKFSKLNS 281

  Fly   564 LTLDRCVHITDIGVGYISTML-------SLTALFLRWCSQVRDFGLQHLC-SMRNLQVLSLAGCP 620
            |.|.:|:.:||      |::|       |||.|.|..|.::.|.|:|.|. |.:|:..:...||.
pombe   282 LFLSKCIGLTD------SSLLSLTKLSQSLTTLHLGHCYEITDIGVQCLLKSCKNITYIDFGGCL 340

  Fly   621 LLTSSGLSSLIQLRHLQELELTNC 644
            .|:...:|::.:|.:||.:.|..|
pombe   341 RLSDIAVSAIAKLPYLQRVGLVKC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 7/28 (25%)
leucine-rich repeat 382..406 CDD:275381 6/27 (22%)
AMN1 383..600 CDD:187754 58/280 (21%)
leucine-rich repeat 431..456 CDD:275381 5/24 (21%)
leucine-rich repeat 457..482 CDD:275381 2/24 (8%)
leucine-rich repeat 483..508 CDD:275381 6/24 (25%)
leucine-rich repeat 509..534 CDD:275381 9/77 (12%)
leucine-rich repeat 535..560 CDD:275381 9/24 (38%)
leucine-rich repeat 561..585 CDD:275381 8/30 (27%)
leucine-rich repeat 586..610 CDD:275381 10/24 (42%)
leucine-rich repeat 636..661 CDD:275381 4/9 (44%)
pof2NP_596079.1 F-box-like 2..43 CDD:463757 10/38 (26%)
leucine-rich repeat 96..121 CDD:275381 9/33 (27%)
leucine-rich repeat 122..141 CDD:275381 2/24 (8%)
AMN1 <143..292 CDD:187754 30/157 (19%)
leucine-rich repeat 148..173 CDD:275381 6/24 (25%)
leucine-rich repeat 174..225 CDD:275381 8/50 (16%)
leucine-rich repeat 226..278 CDD:275381 10/51 (20%)
AMN1 <278..428 CDD:187754 29/93 (31%)
leucine-rich repeat 279..304 CDD:275381 8/30 (27%)
leucine-rich repeat 305..330 CDD:275381 10/24 (42%)
leucine-rich repeat 331..355 CDD:275381 5/23 (22%)
leucine-rich repeat 356..382 CDD:275381 4/9 (44%)
leucine-rich repeat 383..408 CDD:275381
leucine-rich repeat 409..427 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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