DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgs3 and Y43F8C.16

DIOPT Version :8

Sequence 1:NP_524024.1 Gene:Sgs3 / 39288 FlyBaseID:FBgn0003373 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_507816.2 Gene:Y43F8C.16 / 180295 WormBaseID:WBGene00012837 Length:370 Species:Caenorhabditis elegans

Alignment Length:269 Identity:93/270 (34%)
Similarity:138/270 (51%) Gaps:53/270 (20%)


  Fly    22 NCCDCGCPTTTTTCAPRTTQPPCTTTTTTTTTTCAPP-TQQSTTQPPCTTSKPTTPKQTTTQLPC 85
            |.||.|.....:..:        |:||:.||:|.:|| |.|||     ||:||||   |:|..|.
 Worm   135 NKCDSGLEQDGSATS--------TSTTSITTSTLSPPSTVQST-----TTAKPTT---TSTITPT 183

  Fly    86 TT--PTTTKATTTKPTTTKATTTKATTTKPTTTKQTTTQLPCTTPTTTKQTTTQLPCTTPTTTKP 148
            |:  ||:|..|:|.|..:..:|.::|||...|:..|:|.:|.::.|:..|:|        ||.:|
 Worm   184 TSADPTSTITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQST--------TTAEP 240

  Fly   149 TTTKPTTTKP--TTTKPTTTKPTTTK--PTTTKPTTTKPTTTKPTTTKPTTTKP--TTTKPTTTK 207
            |:|..:||.|  :|:..|:|..:||.  ||:|..|.|..:....|.|...::.|  |:|.|:||.
 Worm   241 TSTITSTTVPESSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTITSTGSSNPPSTSTVPSTTT 305

  Fly   208 PTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKP---TTTKPTTTKPT----TPKPCGCKSCG 265
            .||| |..:.|:|.:.:|| |..|...|:..|:|.|   ::|:.|.|..|    |||        
 Worm   306 STTT-PKPSSPSTAEASTT-PVLTSNLTSALTSTSPLLASSTERTATTATSSVSTPK-------- 360

  Fly   266 PGGEPCNGC 274
               .|.:||
 Worm   361 ---HPHHGC 366



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 OOG5_222186
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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