DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6163 and Mes2

DIOPT Version :10

Sequence 1:NP_648460.1 Gene:CG6163 / 39274 FlyBaseID:FBgn0036155 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_730768.1 Gene:Mes2 / 40514 FlyBaseID:FBgn0037207 Length:437 Species:Drosophila melanogaster


Alignment Length:184 Identity:41/184 - (22%)
Similarity:72/184 - (39%) Gaps:34/184 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 APVAPPPLPTATHGRGRPSGSFSWLQTATTPTAPQLPHLITQPPHSQGHGMTYTAFTGLVPPPAT 200
            |||: ..||||||       |...:..|....|     |..:|.              |.|.|..
  Fly     2 APVS-GCLPTATH-------SLQDMSAAAAAIA-----LDMKPK--------------LEPHPLA 39

  Fly   201 VASETVATPPRKLGRPSSLHNSMRGRIIDAIKTRPSLWAGRQRSEKGQGQSRTSAVWKEAAMEMG 265
            .|:   |.|.:|:.:....:.|.:.::|..:...|.||..|..:.||..:.:..| |:....|..
  Fly    40 AAT---AMPSQKIKKLVRRNASDKLKLIQMVHDNPILWDSRLPNFKGAEEEKNRA-WEHIGREFN 100

  Fly   266 LTPTLMQTRWSIIKQRYVDELQKERHAQYSHQSFRSTWEHFDRMSFMREILLKK 319
            .....:...:..:::.|..||   .|.:.....|:..|..::.|.|:|:::.::
  Fly   101 APGRRVARAFKSLRESYRREL---AHVKLMGNGFKPKWSLYEAMDFLRDVIRER 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6163NP_648460.1 MADF 12..98 CDD:214738
MADF 226..316 CDD:214738 19/89 (21%)
Mes2NP_730768.1 MADF 62..149 CDD:214738 19/90 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.