DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plod and AT5G43660

DIOPT Version :10

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_199179.2 Gene:AT5G43660 / 834386 AraportID:AT5G43660 Length:410 Species:Arabidopsis thaliana


Alignment Length:200 Identity:36/200 - (18%)
Similarity:67/200 - (33%) Gaps:50/200 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 FSNEIDWTEKYIHPNYSLQLNESNKIQ--------------------------QPCPDVYWFQIV 554
            |.|..:|    |..||..:..|..|:.                          :|.|.||.|::.
plant   122 FKNYREW----IMSNYQPRFRELYKLDPESLLLPCFRKAVRENTEESFRRIMFEPFPGVYVFKMF 182

  Fly   555 SDAFCDDLVAIMEAHNGWSDGS-------NNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMF 612
            ...|...|:..:|....|...:       ||.::    |..|      :...|::.:....::.|
plant   183 QPDFFQKLLVEVENMRKWLHEAKLMIRKPNNKSK----YGVV------LDDFGMDIMLKPLVEDF 237

  Fly   613 VRPLQERAFTGYFHNPPRALMNFMVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFI 677
            :.|:.:..|.............|::....|....|..|.::|..|:|:.:::..   :||...|.
plant   238 IFPICKVFFPQVCGTMFDTQHGFVIENCEDRDAELGFHVENSDITLNVCLSKQS---EGGEILFT 299

  Fly   678 RYNCS 682
            ...|:
plant   300 GTRCN 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 GT_LH 27..257 CDD:459235
Glyco_tranf_GTA_type 303..>395 CDD:472172
P4Hc 555..719 CDD:214780 23/134 (17%)
AT5G43660NP_199179.2 P4Hc 183..353 CDD:214780 23/134 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.