DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG7607 and Ptprf

Sequence 1:NP_648449.1 Gene:CG7607 FlyBaseID:FBgn0036145 Length:167 Species:Drosophila melanogaster
Sequence 2:XP_006502927.1 Gene:Ptprf MGIID:102695 Length:1924 Species:Mus musculus

Alignment Length:77 Identity:25/78 (32%)
Similarity:34/78 (44%) Gaps:17/78 (22%)


  Fly    82 GRKITFFCMAQGNPRPTITWFKDGAELYQHRFFQVHESHIEANI---------VKSKMEIDPTTQ 137
            ||..|..|.|.|||.|.|:||||        |..|..:.....|         ::..::|:.:.:
Mouse   149 GRTATMLCAAGGNPDPEISWFKD--------FLPVDPAASNGRIKQLRSGGSPIRGALQIESSEE 205

  Fly   138 MDAGFYECQADN 149
            .|.|.|||.|.|
Mouse   206 SDQGKYECVATN 217

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG7607NP_648449.1 Ig 85..159 CDD:143165 23/75 (31%)
PtprfXP_006502927.1 I-set 33..124 CDD:254352
Ig 50..121 CDD:143165
IG_like 141..231 CDD:214653 25/78 (32%)
Ig2_RPTP_IIa_LAR_like 152..232 CDD:143215 23/75 (31%)
I-set 238..321 CDD:254352
Ig3_RPTP_IIa_LAR_like 252..320 CDD:143216
FN3 325..414 CDD:238020
FN3 421..513 CDD:238020
FN3 518..607 CDD:238020
FN3 615..709 CDD:238020
FN3 716..822 CDD:238020
FN3 827..916 CDD:238020
fn3 925..1006 CDD:278470
FN3 1022..>1081 CDD:238020
PTPc 1368..1623 CDD:214550
PTPc 1394..1623 CDD:238006
PTPc 1659..1914 CDD:214550
PTPc 1684..1914 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000235
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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