DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd1-like and AT4G15420

DIOPT Version :8

Sequence 1:NP_524023.1 Gene:Ufd1-like / 39254 FlyBaseID:FBgn0036136 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001329347.1 Gene:AT4G15420 / 827213 AraportID:AT4G15420 Length:684 Species:Arabidopsis thaliana

Alignment Length:238 Identity:67/239 (28%)
Similarity:112/239 (47%) Gaps:35/239 (15%)


  Fly    22 KCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNV--EYPMLFKLT---NVKKSRSSHAGVLE 81
            :.|......||       |.||.:|||....|:....  :.|:.|:|:   :....:::|:||||
plant   203 RVFQAVSFQGN-------GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTHSGVLE 260

  Fly    82 FVADEGKCYLPHWMMENLLLG----EGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENA 142
            |.|::|...||..:..||...    :..::.|..:.||..:::|.||.:..|.|:.|.||:||..
plant   261 FTAEDGTIGLPPHVWSNLFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLGFSDLPNHKAILETI 325

  Fly   143 LRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSETQA----- 202
            ||..|.|:..||:.:.|.:..|:|.|||.:|..::|::|.|:.|:..:|....|......     
plant   326 LRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDIVSPDIVSDQPNQHVLKPLQ 390

  Fly   203 -----SGSGQQGA---------AGTVGGEIAGATNAILEEVVE 231
                 ||:.::|.         ..||...:||:...|::..||
plant   391 YGKSESGTVEEGRYDYYKFVIDEATVEKVMAGSVKVIVKVDVE 433

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ufd1-likeNP_524023.1 UFD1 4..316 CDD:227469 67/239 (28%)
UFD1 17..190 CDD:281187 55/177 (31%)
AT4G15420NP_001329347.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR12555
Phylome 00.000 Not matched by this tool.
11.100

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