DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd1 and AT2G29070

DIOPT Version :10

Sequence 1:NP_524023.1 Gene:Ufd1 / 39254 FlyBaseID:FBgn0036136 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_973557.1 Gene:AT2G29070 / 817455 AraportID:AT2G29070 Length:312 Species:Arabidopsis thaliana


Alignment Length:315 Identity:123/315 - (39%)
Similarity:179/315 - (56%) Gaps:41/315 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSRSSHA 77
            :|.:|...|:|:.|:.:   ::..:|||.||||||||||.|..|::||||||:|:||...::||.
plant     4 DGSSFEQCYRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHC 65

  Fly    78 GVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENA 142
            |||||.||||..|||:|||:|:.|.|||::.::::||...|:.|.|||:.|||||:||||:||..
plant    66 GVLEFTADEGLVYLPYWMMQNMSLEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPKAILETT 130

  Fly   143 LRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQ 207
            ||:::|||.||.|.:.||.|.|.:.|:|.||.:||||||.|..|:|..|:.||:..:.|      
plant   131 LRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKEPEKPQ------ 189

  Fly   208 QGAAGTVGGEIAGATNAILEEVVE-----------TFKGSGVRLDGKKKKESQLE-TPVVKKVLA 260
                     ::..:....|:...|           .|.|||.|||||.:.:::.| |...:|...
plant   190 ---------KLTPSNKRPLQVKEEEEPASKVPKFTPFTGSGKRLDGKAQTQTEPEDTKQQEKPTE 245

  Fly   261 RGVPDYDFQF-------GLIRFDRNIRPIS-DRSQEDD---AVAGNADASDAESF 304
            .|..|.....       |.:.|..|.:..: :.::.||   .|..::..||...|
plant   246 NGKDDEKLSVTTPRQISGKLVFGSNSKSAAKETAKVDDPKNIVQESSTKSDEAKF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd1NP_524023.1 UFD1 17..189 CDD:460828 92/171 (54%)
AT2G29070NP_973557.1 UFD1 8..177 CDD:460828 92/171 (54%)

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