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Protein Alignment Sod1 and sodC
DIOPT Version :9
| Sequence 1: | NP_476735.1 |
Gene: | Sod1 / 39251 |
FlyBaseID: | FBgn0003462 |
Length: | 153 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_416163.1 |
Gene: | sodC / 945343 |
ECOCYCID: | G6886 |
Length: | 173 |
Species: | Escherichia coli |
| Alignment Length: | 155 |
Identity: | 44/155 - (28%) |
| Similarity: | 62/155 - (40%) |
Gaps: | 34/155 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 GDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGD--------NTNGCMSSGPHFNPY- 66
|.:.|:|...:...| ::.|.::..|..|.||||:|..|. ..:...|:|.|.:|.
E. coli 35 GQSIGSVTITETDKG--LEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQN 97
Fly 67 -GKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKIT-------LFGADSIIGRTVVVHADAD 123
||..|. :...||||| |..|...|.|.| |...|.|..:.::||...|
E. coli 98 TGKHEGP--EGAGHLGDL---------PALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGD 151
Fly 124 DLGQGGHELSKSTGNAGARIGCGVI 148
::. :..|..|..|.|..||||
E. coli 152 NMS----DQPKPLGGGGERYACGVI 172
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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