Protein Alignment Sod1 and Sodq

DIOPT Version :10

• Sequence 1: NP_476735.1
• Gene: Sod1 / 39251
• FlyBaseID: FBgn0003462
• Length: 153
• Species: Drosophila melanogaster
• Sequence 2: NP_651440.1
• Gene: Sodq / 43133
• FlyBaseID: FBgn0039386
• Length: 270
• Species: Drosophila melanogaster
• Alignment Length: 161
• Identity: 46/161 - (28%)
• Similarity: 69/161 - (42%)
• Gaps: 37/161 - (22%)

  Fly    11 GDAKGT-----VFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHF-NPYGKE 69
            ||.:|.     :.|.|....:.::|:..|.||..|.|..|:|.|||.::||.|:|..| |.:
  Fly   101 GDGEGAGVAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQFPNNF--- 162

  Fly    70 HGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQG-GHELS 133
                         |||::...|...........:.|||.:.|:||::|:|:.|.||... ..|:.
  Fly   163 -------------LGNVDTKDDGSISAVFQSIYLQLFGINGIVGRSIVIHSKAIDLNTALNAEVF 214

  Fly   134 KST--------------GNAGARIGCGVIGI 150
            .|:              .:.|..|.||||.|
  Fly   215 SSSLQAMPNPLAYQNEENSLGPAIACGVISI 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sod1	NP_476735.1	Cu-Zn_Superoxide_Dismutase	2..150	CDD:469976	45/159 (28%)
Sodq	NP_651440.1	Sod_Cu	108..243	CDD:459663	40/150 (27%)