DRSC/TRiP Functional Genomics Resources

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Protein Alignment: APP-BP1 and Uba5

Sequence 1:NP_001261699.1 Gene:APP-BP1 FlyBaseID:FBgn0261112 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_572722.2 Gene:Uba5 FlyBaseID:FBgn0030305 Length:404 Species:Drosophila melanogaster

Alignment Length:148 Identity:40/149 (27%)
Similarity:56/149 (38%) Gaps:35/149 (23%)


  Fly    16 KKYDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGNNFF 80
            |.|:|            :....|.:|.|..||..||..|...|||...:.|...|:..:: |..|
  Fly    66 KDYER------------IRYKAVAIVGVGGVGSVTADMLTRCGIGKLILFDYDKVELANM-NRLF 117

  Fly    81 LDSSYLGKSKALACMQLLQELNPDV-------NGDYVDESADFL--------LANRP-----NFF 125
            ......|.||..|....|..:||||       |...|:....||        :|.:|     :..
  Fly   118 FTPDQAGLSKVAAAAATLSFINPDVEIETHNYNITTVENFDRFLDTISQGGRIAGQPVDLVLSCV 182

  Fly   126 DSFDLVIASN--LNEQTL 141
            |:|:..:|.|  .||:.|
  Fly   183 DNFEARMAINAACNERNL 200

Known Domains:


GeneSequenceDomainRegion External IDIdentity
APP-BP1NP_001261699.1 APPBP1_RUB 16..522 CDD:238770 40/149 (27%)
ThiF 17..>171 CDD:223552 39/148 (26%)
Uba5NP_572722.2 ThiF_MoeB_HesA_family 52..297 CDD:238386 40/149 (27%)
ThiF 53..310 CDD:279270 40/149 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C120297101
eggNOG 1 0.900 E1_COG0476
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10953
RoundUp 00.000 Not matched by this tool.
32.930

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