DRSC/TRiP Functional Genomics Resources

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Protein Alignment simj and gatad2b

DIOPT Version :10

Sequence 1:NP_001261685.1 Gene:simj / 39212 FlyBaseID:FBgn0010762 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_001038440.1 Gene:gatad2b / 562045 ZFINID:ZDB-GENE-060503-655 Length:645 Species:Danio rerio


Alignment Length:741 Identity:210/741 - (28%)
Similarity:290/741 - (39%) Gaps:236/741 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AALSNRDLRALTANNAGLTITPSASPATNNGTTSNSSNTNSNSSSTTTTTNNNNNSSSNTNSSSA 95
            |.|..:||.||........:.....|..:.|...            ........|.|........
Zfish    45 ALLKRKDLAALEGAAVAAAMAEGKGPCGSQGLMG------------AVAYEEKMNGSLRVGGHGG 97

  Fly    96 NNNNNNNSINASDGVTGATSGSIGGGQDENKVQRRVLRPRTEPKSYAEAPDIVLLPARTNGRQQN 160
            .:.|...:|             :....|.:..:..::|.|..|     :||:::|.         
Zfish    98 PSKNGKENI-------------VDEPVDMSARRSEMVRERRTP-----SPDVIILS--------- 135

  Fly   161 GNIDSETDDEEMPPYVPIKELSHAEL--------KEREKSLRKLRQDLRNEETKLMLLKKLKQSQ 217
               |:|.......|: |.::...|.|        :||::.::.||::||.||.||:|||||:|| 
Zfish   136 ---DNEASSPRSTPH-PEEKQHQANLEMFKGKTGEERQQMIKALREELRLEEAKLVLLKKLRQS- 195

  Fly   218 QVMKENLVVTPTSVSPNNPLSAIPAALTSK---GSLSVTP-------------------TSA--- 257
            |:.||| ||....|..|.|.|..|:.:.|.   |.|.|.|                   .||   
Zfish   196 QMQKEN-VVQKVPVVQNAPSSVQPSPMHSSQGLGKLPVRPGMHSSEPQNLRTAQGHTVIRSAANA 259

  Fly   258 ------------VPLPAHSKGSR-SSLSGSGGPAVSISATNSRTGSSSSAAAAASAIAAAAMSGQ 309
                        .|.||..:|.| .|..|.|         .|.||...:|.:...| |:..:...
Zfish   260 SLPPMMMSQRVIAPNPAQLQGQRLPSKPGMG---------RSSTGGLGNAVSYQQA-ASQQVGVS 314

  Fly   310 HRSGSNSILPPPRSSLPAGATLAAGTTITPATSSSHRSSNLPPRTNLPNLTITPSVTITPTSAPP 374
            .||||:|.:....:.:.|......|..::...:.|                              
Zfish   315 QRSGSSSAIYMNLAHMQAAGAAGVGVGVSGVGAVS------------------------------ 349

  Fly   375 SSLKPRNVPGTISNSVSITPALPLSQSHQNQHNDQKNDRSTPREDAQTPAQRQAAAKMALRKQLE 439
                    |.|:|::.|:...           |||              |..|||||:|||||||
Zfish   350 --------PSTLSSASSVASL-----------NDQ--------------ASSQAAAKLALRKQLE 381

  Fly   440 KTLLQIPPPKPPPPEMHFIPNPSNTDFVYLLGLETVVDYL--TVNKKANAV--AAPFRCAQCKID 500
            ||||:|||||||.|.:||:|:.:|::|:|::|||.||..:  :..|...::  ..||.||||:.|
Zfish   382 KTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKMRGSLPHVEPFFCAQCRTD 446

  Fly   501 FTPVWKWEKQTNKDPKVICEQCVTSNVKKALKAEHTNRLKQAFVKALQQEQEIEQRLASQSSPSP 565
            |||.||.|    |..:::||||:|||.|||||||||||||.||||||||||||||||..|::.||
Zfish   447 FTPHWKQE----KSGRILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSP 507

  Fly   566 VDNHGSSGGGNSLSVSAVSSNSS--SSHMQREREQ--------------------LQASHASAAA 608
                 |||    .:|.:||...:  ..|..|:..|                    .|||..|.|:
Zfish   508 -----SSG----QTVPSVSKGETMIRHHALRQTPQPQAALQRGLSSSARGVLSNFAQASQLSVAS 563

  Fly   609 ALVNLPPSVTVIPTKCQTPTPATPRPTPPPPQSQATPPPSSGGSRSSRAAATAAAAA--IAAQQA 671
            .|:.:...      :|                  .:...|.||:.|||....:....  |.....
Zfish   564 GLLGMTSK------RC------------------GSSSSSGGGTSSSRPQHDSRRQIYNIPGLNI 604

  Fly   672 GILSPGPSPAHHHEPTTSSRSSRNDR 697
            ..|:||....|       ..||..||
Zfish   605 AYLNPGAIGGH-------KASSLADR 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
simjNP_001261685.1 P66_CC 185..225 CDD:465178 22/47 (47%)
gatad2bNP_001038440.1 P66_CC 164..203 CDD:465178 21/40 (53%)
GATA 440..474 CDD:425605 22/37 (59%)

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