DRSC/TRiP Functional Genomics Resources

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Protein Alignment simj and gatad2a

DIOPT Version :10

Sequence 1:NP_001261685.1 Gene:simj / 39212 FlyBaseID:FBgn0010762 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_012818359.1 Gene:gatad2a / 549596 XenbaseID:XB-GENE-1015730 Length:604 Species:Xenopus tropicalis


Alignment Length:569 Identity:181/569 - (31%)
Similarity:262/569 - (46%) Gaps:146/569 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 APDIVLLPARTNGRQQNGNIDSETDDEEM-----PPYVPIKE----LSHAELKEREKSLRKLRQD 199
            :||:::|.            |:|.....|     .|..|..|    :..:..:|||:.:::|:::
 Frog   139 SPDVIVLS------------DNEPSSPRMNGLTKVPKEPSSETFLLMRKSSPEERERMIKQLKEE 191

  Fly   200 LRNEETKLMLLKKLKQSQQVMKENLVVTPTSVSPNNPLSAIPAALTSKGSLSVTPTSA-VPLPAH 263
            ||.||.||:|||||:|| |:.|:   ..|..|:.....:.||..|...|..:.:..|. :.:|..
 Frog   192 LRLEEAKLVLLKKLRQS-QIQKD---TAPQKVTSRISGTVIPPPLVRGGQQAPSKQSTQIVMPPL 252

  Fly   264 SKGSRSSLSGSGGPAVSISAT---NSRTGSSSSAAAAASAIAAAAMSGQHRS-GSNSILPPPRSS 324
            .:|::         .:|:|..   |.|                     ||.| |...:|..||:|
 Frog   253 VRGAQ---------PISVSPQQIHNIR---------------------QHPSTGPPPLLLAPRAS 287

  Fly   325 LPA----GATLAAGTTITPATSSSHRSSNLPPRTNLPNLTITPSVTITPTSAPPSSLKPRNVPGT 385
            :|:    |..:.....|..|..:   ::||  ..|:|             .|.|:|||     |:
 Frog   288 VPSVQMQGQRIIQQGLIRVANVA---NTNL--LVNIP-------------QASPTSLK-----GS 329

  Fly   386 ISNSVSITPALPLSQSHQNQHNDQKNDRSTPREDAQTPAQRQAAAKMALRKQLEKTLLQIPPPKP 450
            ...:.||:.|             ..||         :||.||||||:|||||||||||:||||||
 Frog   330 AGTATSISSA-------------NSND---------SPASRQAAAKLALRKQLEKTLLEIPPPKP 372

  Fly   451 PPPEMHFIPNPSNTDFVYLLGLETVVDYLTVNK----KANAVAAPFRCAQCKIDFTPVWKWEKQT 511
            |.||::|:|:.:|.:|:||:|||.||..|..::    :|.:...|:.|||||.|||..|:.|   
 Frog   373 PAPELNFLPSAANNEFIYLVGLEEVVQNLLESQGKISQAPSSHEPYICAQCKTDFTSRWRQE--- 434

  Fly   512 NKDPKVICEQCVTSNVKKALKAEHTNRLKQAFVKALQQEQEIEQRLASQSSPSPVDNHGSSGGGN 576
             |:..::||.|::||.||.||||||||||.|||||||||||||||:..||| ||..:....    
 Frog   435 -KNGTIMCEVCMSSNQKKTLKAEHTNRLKAAFVKALQQEQEIEQRILQQSS-SPAQSKADH---- 493

  Fly   577 SLSVSAVSSNSSSSHMQREREQLQASHASAAAALVNLPPSVTVIPTKCQTPTPATPRPTPPPPQS 641
              ||...|...|.:.:.|      ....:....|...||:     ||.........|...|..:|
 Frog   494 --SVQHHSLKQSPTPISR------GLSGTTRGILHTFPPT-----TKLPNAGTLANRAGKPGDRS 545

  Fly   642 ---------QATPPPSSGGSRS--SRAAATAAAAAIAAQQAGILSPGPS 679
                     ....|.::||:.:  :...|...:||:..|:..:|...||
 Frog   546 LNKSNMTGNWKKSPINAGGTLAFVNPGLAMHKSAAVDRQREYLLDMIPS 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
simjNP_001261685.1 P66_CC 185..225 CDD:465178 19/39 (49%)
gatad2aXP_012818359.1 P66_CC 177..213 CDD:465178 18/36 (50%)
GATA 420..454 CDD:425605 18/37 (49%)

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