Protein Alignment Gem3 and rhlE

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_415318.1
• Gene: rhlE / 945425
• ECOCYCID: EG11235
• Length: 454
• Species: Escherichia coli
• Alignment Length: 525
• Identity: 130/525 - (24%)
• Similarity: 226/525 - (43%)
• Gaps: 83/525 - (15%)

  Fly    26 TFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPN 90
            :|:.|.|..::|..:....:..||.||..|||..|...||:..:::|||||..:.:.::|..  .
E. coli     2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL--I 64

  Fly    91 INQPH--------AMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES-RV 146
            ..|||        |:|:.||||||.|:.:......| :.:.:.....||..:.....::... .|
E. coli    65 TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK-YLNIRSLVVFGGVSINPQMMKLRGGVDV 128

  Fly   147 IIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQ 211
            ::.||||||.|.......:.::.:|||||||::.....: |.:.:::..:|..||.:..|||:..
E. coli   129 LVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFI-HDIRRVLTKLPAKRQNLLFSATFSD 192

  Fly   212 NLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAI 276
            ::.....|::..|:.|..:.|.|....:.|.|:       .|::.| |.::|..:..:..::|.:
E. coli   193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVH-------FVDKKR-KRELLSHMIGKGNWQQVL 249

  Fly   277 IFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHA 341
            :|..::..|:.....|...||....|.|...|..|......:::..:|:|||||:.|||:|....
E. coli   250 VFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEEL 314

  Fly   342 NLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSKKIATAWSVLEFPKEPM 406
            ..|:|.:.|.....|:|||||.||..:.|.|::.:. ..|.:..|::.|.:..     |.|:..:
E. coli   315 PHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLLRDIEKLLKK-----EIPRIAI 373

  Fly   407 PNEFNFWDFEKYNFDYYIKEENPLQEMPMPIKENRSKENVDASSVDLENLQKDQDGKR--RDPDK 469
            |.         |..|..||.|        ||:..|.:.....         :.|.|.|  :.|.:
E. coli   374 PG---------YEPDPSIKAE--------PIQNGRQQRGGGG---------RGQGGGRGQQQPRR 412

  Fly   470 LPVALENVETQKELELENLPESSHNNKNLRVKEKEIVRQGKLKETNSKAGGSKTNKTERRKKSNT 534
                               .|....:.:.:..||...|.|     ::|..|.:    :||::...
E. coli   413 -------------------GEGGAKSASAKPAEKPSRRLG-----DAKPAGEQ----QRRRRPRK 449

  Fly   535 PSKLQ 539
            |:..|
E. coli   450 PAAAQ 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	107/391 (27%)
rhlE	NP_415318.1	PRK10590	1..454	CDD:236722	129/523 (25%)