Protein Alignment Gem3 and ddx6

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: XP_684923.1
• Gene: ddx6 / 564633
• ZFINID: ZDB-GENE-070912-83
• Length: 484
• Species: Danio rerio
• Alignment Length: 412
• Identity: 137/412 - (33%)
• Similarity: 222/412 - (53%)
• Gaps: 26/412 - (6%)

  Fly    15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIY 79
            ::|||...:...||:..|.|.||.|:....:..|:.||..:||:||:..|::.::|:||||:..|
Zfish    87 KTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAY 151

  Fly    80 VIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES 144
            :|.:::..:...:...|:::|||||||:||......:.|.....|..|..|||::..|..|::|:
Zfish   152 LIPLLERIDLKKDSIQAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDET 216

  Fly   145 -RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSAT 208
             .|:|.||||:|.|.:..|..|.:::::||||||:|.....:| .:.:::.::.|.|||:..|||
Zfish   217 VHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQ-MMEEILSSLSKQRQILLYSAT 280

  Fly   209 YDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYE 273
            :..::.:.:...:.||..|:..|..| |.|:.|:...:.:        |.|:..|..:|::|...
Zfish   281 FPLSVQKFMNSHLQKPYEINLMEELT-LKGVTQYYAYVTE--------RQKVHCLNTLFSRLQIN 336

  Fly   274 QAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDS 338
            |:|||.:|..|.:.....::..|..|..|...|.|..|..||..:||...|.||.|||..||:|.
Zfish   337 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDI 401

  Fly   339 PHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRF--REMSKKIATAWSVLEF 401
            ...|:|||.|.|:...||||||||:||||..|:||..|.   ...||  :.:.:::.|
Zfish   402 QAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLIT---YDDRFNLKGIEEQLGT------- 456

  Fly   402 PKEPMPNEFNFWDFEKYNFDYY 423
            ..:|:|:..   |...|..:|:
Zfish   457 EIKPIPSSI---DKSLYVAEYH 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	131/385 (34%)
ddx6	XP_684923.1	SrmB	99..462	CDD:440279	130/382 (34%)