Protein Alignment Gem3 and pit

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_524446.3
• Gene: pit / 42595
• FlyBaseID: FBgn0266581
• Length: 680
• Species: Drosophila melanogaster
• Alignment Length: 509
• Identity: 125/509 - (24%)
• Similarity: 228/509 - (44%)
• Gaps: 79/509 - (15%)

  Fly     5 IAHSLAGGEERSSDVAPGQVKTFEELR--LYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLII 67
            :..|||..:.|.||     .::|..|:  :....|..:|...|...|:||:.::...|...||:.
  Fly   170 VESSLAALDYRDSD-----DRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVG 229

  Fly    68 QSKSGTGKTLIYVIAVVQSFN-----PNINQPHAMIVVPTRELAIQ----VQDTFFHLCKSFRDF 123
            .:::|:||||.::|..|:..|     |. |....:|:.|||||::|    :::...|...::
  Fly   230 AAQTGSGKTLAFLIPAVELINKLRFMPR-NGTGVIIISPTRELSMQTFGVLKELMAHHHHTY--- 290

  Fly   124 KCSAFIGGTDVAKDRKRMNES-RVIIGTPGRLL-HLYENRVFDVSKLRLLVLDEADQLYQTKSLQ 186
              ...:||::...:.:::.:. .:::.|||||| ||..:..|....|:.|::||.|::.:. ..:
  Fly   291 --GLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEI-GFE 352

  Fly   187 HTVSKLIEAMPKNRQIIACSATYDQNLDERLAK--VMDKPMLI---SNSERATVLLGIRQFVYEL 246
            ..:.::|..:||.||.:..|||....: |.|:|  :..:|:.:   .|.:.||| .|:.|.....
  Fly   353 EELKQIINLLPKRRQTMLFSATQTARI-EALSKLALKSEPIYVGVHDNQDTATV-DGLEQGYIVC 415

  Fly   247 PQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSER 311
            |.:.        :|.:|.....:...::.::|.||.|....:........:....|.|..:|::|
  Fly   416 PSEK--------RLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKR 472

  Fly   312 LHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGR-FGSKGIAITF 375
            ...|..:.|....||:.||:.|||:|.|..:.::..|||.|...|:||:||..| .|:.|.|:
  Fly   473 TTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHAL-- 535

  Fly   376 IASKKESQRFREMSKKIATAWSVLEFPKEPMPNEFNF-W--------DFEKYNFDYYIKEENPLQ 431
            :..:.|...|..          .|:..|.|: |||.| |        ..||.....|...::..:
  Fly   536 LLMRPEELGFLR----------YLKAAKVPL-NEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE 589

  Fly   432 EMPMPIK---ENRSKENVDASSVDLENLQKD-------------QDGKRRDPDK 469
            .....::   .::.|:..:.:::||:.:.|.             ...||..|:|
  Fly   590 AFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEK 643

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	103/401 (26%)
pit	NP_524446.3	DEADc_DDX18	198..395	CDD:350700	55/204 (27%)
		SF2_C_DEAD	408..537	CDD:350174	36/138 (26%)
		DUF4217	570..627	CDD:464056	7/56 (13%)