DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gem3 and CG7483

DIOPT Version :10

Sequence 1:NP_524019.1 Gene:Gem3 / 39195 FlyBaseID:FBgn0011802 Length:1028 Species:Drosophila melanogaster
Sequence 2:NP_649788.2 Gene:CG7483 / 40987 FlyBaseID:FBgn0037573 Length:399 Species:Drosophila melanogaster


Alignment Length:375 Identity:121/375 - (32%)
Similarity:197/375 - (52%) Gaps:13/375 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AHSLAGGE-ERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQS 69
            |..|:..| |.|.||.  .:.||..:.|...||.|:....|..|:.||..:|...:...|:|.|:
  Fly     8 AEDLSNVEFETSEDVE--VIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQA 70

  Fly    70 KSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
            :||||||..:.|:::||.:..:.:...:.:.||||||:|:|.....| ....:.:|...||||::
  Fly    71 QSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILAL-GDMMNVQCHVCIGGTNL 134

  Fly   135 AKDRKRMNESR-VIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPK 198
            .:|.::::..: ::.|||||:..:.:.||.....:::|||||||::. .|..:..:..:...:|.
  Fly   135 GEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLPP 198

  Fly   199 NRQIIACSATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQIL 263
            ..|::..|||....:.|..:|.|..|:.|........|.||:||..       :||....|...|
  Fly   199 ATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFV-------AVEREEWKFDTL 256

  Fly   264 GQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVA 328
            ..:::.|...||:||.:::.:.|.....:..:......:.|.|.|.||..:.:.:|....|:|:.
  Fly   257 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLIT 321

  Fly   329 TDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIAS 378
            ||:.|||:|....:||||.|.|.:...|:|||||:||||.||:||.|:.|
  Fly   322 TDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gem3NP_524019.1 SrmB 26..409 CDD:440279 114/354 (32%)
CG7483NP_649788.2 DEAD-like_helicase_N 4..399 CDD:475120 121/375 (32%)

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