Protein Alignment Gem3 and abs

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Alignment Length: 396
• Identity: 113/396 - (28%)
• Similarity: 184/396 - (46%)
• Gaps: 29/396 - (7%)

  Fly     2 ERE-IAHSLAGGEERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDL 65
            ||| :.|.|....|..:...|  :::|.|::..:.:||||.......||.||...:|..||..||
  Fly   155 EREAVRHELRILVEGETPSPP--IRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDL 217

  Fly    66 IIQSKSGTGKTLIYVIAVVQ---------SFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFR 121
            |..:.:|:||||::|:.|:.         .|..| ..|:.:|:.|:||||.|..:...|..|..:
  Fly   218 IGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERN-EGPYGLIICPSRELAKQTHEIIQHYSKHLQ 281

  Fly   122 -----DFKCSAFIGGTDVAKDRKRMNES-RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLY 180
                 :.:....:||..|::....::.. .:::.|||||:.:.:.::..:...|.|.:||||::.
  Fly   282 ACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMI 346

  Fly   181 QTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYE 245
            . ...:..|..:.......||.:..|||..:.:.......:.||:.|:........:.:.|.|..
  Fly   347 D-MGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEY 410

  Fly   246 LPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSE 310
            :.|:...|       .:|..:....|  ..:|||..:...|....||...|::...|.|..:|.|
  Fly   411 VKQEAKVV-------YLLDCLQKTAP--PVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEE 466

  Fly   311 RLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITF 375
            |....:.||.....:|||||:.::|:|.|:...|||.|.|.|...|:|||||.||..:||:|.|.
  Fly   467 RSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTL 531

  Fly   376 IASKKE 381
            |....|
  Fly   532 INKTTE 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	106/371 (29%)
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	55/206 (27%)
		SF2_C_DEAD	404..532	CDD:350174	46/136 (34%)