Protein Alignment Gem3 and Dbp80

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_001263168.1
• Gene: Dbp80 / 3354919
• FlyBaseID: FBgn0024804
• Length: 481
• Species: Drosophila melanogaster
• Alignment Length: 444
• Identity: 131/444 - (29%)
• Similarity: 211/444 - (47%)
• Gaps: 60/444 - (13%)

  Fly    12 GEERSSDVA-PGQ--------------------------------VKTFEELRLYRNLLNGLKRN 43
            |||...||| |.:                                |||||.|.|..:||.|:...
  Fly    27 GEETDFDVADPAETSLLIKILGKGLVNTKLSLDIQQKNPNSPLHSVKTFEALHLKASLLKGIYAM 91

  Fly    44 NFVTPTKIQAAAIPMALA--KMDLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELA 106
            .|.||:|||..|:|..||  ..::|.||:||||||..:|:|::...|..:|.|..:.:.||.|||
  Fly    92 GFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELA 156

  Fly   107 IQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNESRVIIGTPGRLLHL-YENRVFDVSKLRL 170
            ||..:....:.:..|:.|....:.|.:|  ||.:..|..::|||||:||.. .:.|:||:.|:.:
  Fly   157 IQTGEVAARMGQFCREIKLRFAVRGEEV--DRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISV 219

  Fly   171 LVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERLAKVMDKPMLISNSERATV 235
            .||||||.:..|:.......::.:.:..:.|::..||||.:.:.:....::..|.:|........
  Fly   220 FVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEES 284

  Fly   236 LLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCH 300
            |..|:|:..:...:..       |...:..|:..:...|||||..::..|......:|:.|....
  Fly   285 LENIKQYYVKCKNEEG-------KYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVA 342

  Fly   301 LISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPP------QDHVTYLHR 359
            :::|.:...:||.|.:.:|:...::|:.|::::||:|.....:|:|.|.|      .|..|||||
  Fly   343 VLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHR 407

  Fly   360 IGRAGRFGSKGIAIT----FIASKKESQRFREMSKKIATAWSVLEFPKEPMPNE 409
            |||.|||  :..|:|    ....|.||.:   :.|:|..:.|..|.....||.|
  Fly   408 IGRTGRF--EPSALTRNSPIFGVKAESGK---IGKEINRSSSGAESGSREMPKE 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	121/395 (31%)
Dbp80	NP_001263168.1	DEADc_DDX19_DDX25	80..277	CDD:350721	66/198 (33%)
		SF2_C_DEAD	288..414	CDD:350174	36/132 (27%)