Protein Alignment Gem3 and ddx39aa

DIOPT Version :10

• Sequence 1: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Sequence 2: NP_001315271.1
• Gene: ddx39aa / 325550
• ZFINID: ZDB-GENE-030131-4275
• Length: 427
• Species: Danio rerio
• Alignment Length: 381
• Identity: 119/381 - (31%)
• Similarity: 194/381 - (50%)
• Gaps: 13/381 - (3%)

  Fly    27 FEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPNI 91
            |.:..|...||..:....|..|:::|...||.|:..||::.|:|||.|||.::|:|.:|...|..
Zfish    46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVD 110

  Fly    92 NQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRK--RMNESRVIIGTPGRL 154
            .|...:::..|||||.|:...:....|.....||:.|.||..:.||..  :.|...:::|||||:
Zfish   111 GQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAVFFGGMSIKKDEDVLKKNCPHIVVGTPGRI 175

  Fly   155 LHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERLAK 219
            |.|..|:...:..::..||||.|::.:...::..|..:....|..:|.:..|||..:.:.....|
Zfish   176 LALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK 240

  Fly   220 VMDKPM-LISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQM 283
            .|..|| :..:.|....|.|::|:..:|....        |.:.|..:.:.|.:.|.:||..|..
Zfish   241 FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE--------KNRKLFDLLDVLEFNQVVIFVKSVP 297

  Fly   284 RADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINID 348
            |..:....|.........|...|.|.|||..::.:::|..||||||:|..||:|....|:|.|.|
Zfish   298 RCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362

  Fly   349 PPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSKKIATAWSVLEFPKE 404
            .|:|..|||||:.||||||:||:|:||::.:.:::...::..:...  :|.|.|:|
Zfish   363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEV--NVAELPEE 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	119/381 (31%)
ddx39aa	NP_001315271.1	DEADc_DDX39	43..250	CDD:350708	62/203 (31%)
		SF2_C_DEAD	261..390	CDD:350174	49/136 (36%)