DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gem3 and eIF4A

DIOPT Version :10

Sequence 1:NP_524019.1 Gene:Gem3 / 39195 FlyBaseID:FBgn0011802 Length:1028 Species:Drosophila melanogaster
Sequence 2:XP_061516209.1 Gene:eIF4A / 1279280 VectorBaseID:AGAMI1_009096 Length:438 Species:Anopheles gambiae


Alignment Length:410 Identity:128/410 - (31%)
Similarity:203/410 - (49%) Gaps:47/410 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPNI 91
            |:::.|...||.|:....|..|:.||..||...:...|:|.|::||||||..:.||::|.....|
Mosquito    67 FDQMGLREELLRGIYAYGFEKPSAIQQRAIVPCVKGSDVIAQAQSGTGKTATFSIAILQQIKTEI 131

  Fly    92 NQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES-RVIIGTPGRLL 155
            ....|:|:.||||||.|:|.....| ..|...:|.|.||||:|..|.:|:.:. .:::|||||:.
Mosquito   132 PDCQALILAPTRELASQIQKVVISL-GDFLKAQCHACIGGTNVRDDMRRLEQGCHIVVGTPGRVH 195

  Fly   156 HLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERLAKV 220
            .:....|.....:::.||||||::. ::..:..:..:.:.:|.:.|:|..|||...::.|.....
Mosquito   196 DMISRNVLQPKNIKMFVLDEADEML-SRGFKDQIQDVFQKLPADVQVILLSATMPADVLEVSQHF 259

  Fly   221 MDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRA 285
            |..|:.|...:....|.|||||..::..::       .|:..|..:::.|...||:||.:::.:.
Mosquito   260 MRNPVKILVKKEELTLEGIRQFYVDVKYED-------WKIGTLCDLYDTLSITQAVIFCNTRRKV 317

  Fly   286 DSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPP 350
            |.....:|........:.|.|||.:|..:.:.:|..:.|:|:.|||:|||:|....:||||.|.|
Mosquito   318 DQLTEQMTEKTFTVSAMHGDMEQRDRDLIMKQFRTGSSRVLITTDLLARGIDVQQVSLVINYDLP 382

  Fly   351 QDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSKKIATAWSVLEFPKEPMPNEFNFWDF 415
            .....|:|||||.||||.||:||.|:.         |..|::..                   |.
Mosquito   383 TLRENYIHRIGRGGRFGRKGVAINFVT---------EQDKRVLA-------------------DI 419

  Fly   416 EK-YNFDYYIKEENPLQEMP 434
            || ||        ..::|||
Mosquito   420 EKHYN--------TTIEEMP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gem3NP_524019.1 SrmB 26..409 CDD:440279 120/382 (31%)
eIF4AXP_061516209.1 None

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