DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gem3 and LOC1273765

DIOPT Version :10

Sequence 1:NP_524019.1 Gene:Gem3 / 39195 FlyBaseID:FBgn0011802 Length:1028 Species:Drosophila melanogaster
Sequence 2:XP_312776.3 Gene:LOC1273765 / 1273765 VectorBaseID:AGAMI1_000888 Length:400 Species:Anopheles gambiae


Alignment Length:366 Identity:121/366 - (33%)
Similarity:196/366 - (53%) Gaps:12/366 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLI 78
            |.|.||.  .:.||..:.|...||.|:....|..|:.||..:|...:...|:|.|::||||||..
Mosquito    18 ETSEDVE--VLPTFNSMGLREELLRGIYAYGFEKPSAIQQRSIQPIVKGRDVIAQAQSGTGKTAT 80

  Fly    79 YVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNE 143
            :.|:::||.:..:.:...:.:.||||||:|:|.....| ..|.:.:|.|.||||::.:|.::::.
Mosquito    81 FSISILQSMDTTLRETQVLCLSPTRELAVQIQKVILAL-GDFMNVQCHACIGGTNLGEDIRKLDY 144

  Fly   144 SR-VIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSA 207
            .: |:.|||||:..:.:.||.....:::|||||||::. .|..:..:..:...:|...|::..||
Mosquito   145 GQHVVSGTPGRVFDMIKRRVLRTRSIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQVVLISA 208

  Fly   208 TYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPY 272
            |....:.|..:|.|..|:.|........|.||:||..       :||....|...|..:::.|..
Mosquito   209 TLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFV-------AVEREEWKFDTLCDLYDTLTI 266

  Fly   273 EQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVD 337
            .||:||.:::.:.|.....:..:......:.|.|.|.||..:.:.:|:...|:|:.||:.|||:|
Mosquito   267 TQAVIFCNTRRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRSGQSRVLITTDVWARGID 331

  Fly   338 SPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIAS 378
            ....:||||.|.|.:...|:|||||:||||.||:||.|:.|
Mosquito   332 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gem3NP_524019.1 SrmB 26..409 CDD:440279 117/354 (33%)
LOC1273765XP_312776.3 DEAD-like_helicase_N 7..400 CDD:475120 121/366 (33%)

Return to query results.
Submit another query.