DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RasGAP1 and Rasa1

DIOPT Version :10

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:NP_663427.2 Gene:Rasa1 / 218397 MGIID:97860 Length:1038 Species:Mus musculus


Alignment Length:777 Identity:165/777 - (21%)
Similarity:301/777 - (38%) Gaps:181/777 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DTREVRIEEQLKVKIGEAKNLSSRNAANTSCS--------TQGTRDVY--CTIALDQEEICRTPT 89
            |..|.:|....|:...||.||..  .....||        |.|...:|  ....:.:.:||.|| 
Mouse   335 DPHEGKIWFHGKISKQEAYNLLM--TVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTP- 396

  Fly    90 IERTLTPFFGEEHQFKIPRRFRYLTIYLWDRDMKQDKPIGKIA--IKREELHMYNHKDHWFSLRP 152
                       .:||.:..|:.              ..||.|.  .::|::     .:.::...|
Mouse   397 -----------NNQFMMGGRYY--------------NSIGDIIDHYRKEQI-----VEGYYLKEP 431

  Fly   153 VD-QDSEVQGMVNVEVAFTEAQQTQSLSEGIDLGQ---HTLRH------HQNLPHHSH------- 200
            |. ||                 |.|.|::.:| |:   :|:|.      ::|:....:       
Mouse   432 VPMQD-----------------QGQVLNDTVD-GKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKG 478

  Fly   201 QQRAHLNDYKENSELSNIQRASAAAASSSSAAMTLKTRAA-----GLFGHVHHPPSQTQHFP--- 257
            ::..:|....|.|:...|...|...|:.....:.|...:.     .|||..:......|||.   
Mouse   479 KRWKNLYFILEGSDAQLIYFESEKRATKPKGLIDLSVCSVYVVHDSLFGRPNCFQIVVQHFSEEH 543

  Fly   258 -IINTTSTSSDQLSNW-KSHGRFVGVTIKVPACVDLAKKQGTCDPFVVCTAH------------- 307
             |......:.:|..:| |....|..:....|...:...:|.:.....:..||             
Mouse   544 YIFYFAGETPEQAEDWMKGLQAFCSLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCN 608

  Fly   308 -YSNKHQVTRRTKQRKKTVDPEFDEAMYFDLHIDADAGSTNTTGSNKSAGSLESSANKGYSIYPV 371
             |.|..||.:  ...::..:|.:.|...|| .:..|......|.|||:..|.:            
Mouse   609 IYLNSVQVAK--THAREGQNPVWSEEFVFD-DLPPDINRFEITLSNKTKKSKD------------ 658

  Fly   372 GGADLVEIVVSVWHDAHGAMSDKVFLGEVRLPMLNKQEQQAVNPSAWYYLQPRSMTHSSRSLNAT 436
              .|::.:...:.....|..:|:.||....:|:      :.:.|                     
Mouse   659 --PDILFMRCQLSRLQKGHATDEWFLLSSHIPL------KGIEP--------------------- 694

  Fly   437 PRSCATPPGTRLSVDSTIGSLRLNLNYTADHVFPLATYDDLMNLLLESVDQRPITVSAVSILGEL 501
                              ||||:...|:.:.:.|...|.:...|:|:.  :..:..:...:.|: 
Mouse   695 ------------------GSLRVRARYSMEKIMPEEEYSEFKELILQK--ELHVVYALSHVCGQ- 738

  Fly   502 VSGKTEVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLVSKMMDEAMRLSGLHYL 566
              .:|.:|..|:::|.|.:..:.::..|.|.|||...:.||:||..||.|.:|::.|:.:...::
Mouse   739 --DRTLLASILLKIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFV 801

  Fly   567 HQTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTNLHNLQDYVERVFEAITKSADRCPKVLCQIFH 631
            |..|:..:.:|:..|:.||:.|||::....|:|||.:|...:..:.|.|..:::..|..|..|:.
Mouse   802 HHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLSILSELVEKIFMASEILPPTLRYIYG 866

  Fly   632 DLRECAGEHFPSNREVRYSVVSGFIFLRFFAPAILGPKLFDLTTERLDAQTSRTLTLISKTIQSL 696
            .|::.....:|:|..:|..|||||:|||...||||.|::|::.::......:|||||::|::|:|
Mouse   867 CLQKSVQHKWPTNNTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLTLVAKSVQNL 931

  Fly   697 GNLVSSRSSQQTCKEEFTVELYKKFCTEQH-----VDAVKHFLEVISTPSHASSSVHPAAAA 753
            .|||     :...||.:...:.....:.:|     :|.:.:..|:..|..|:.:.:....||
Mouse   932 ANLV-----EFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAA 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046 25/137 (18%)
C2B_RasA3 280..462 CDD:175977 29/195 (15%)
RasGAP_GAP1_like 473..740 CDD:213330 76/271 (28%)
PH_GAP1-like 763..867 CDD:269950
BTK 862..897 CDD:128417
Rasa1NP_663427.2 SH2_Nterm_RasGAP 152..255 CDD:198216
SH3_RasGAP 272..330 CDD:212722
SH2_Cterm_RasGAP 341..417 CDD:198217 21/103 (20%)
PH_RASA1 480..567 CDD:270080 17/86 (20%)
C2_Ras_p21A1 582..707 CDD:176045 29/186 (16%)
RasGAP_p120GAP 705..1036 CDD:213340 81/294 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.