DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and gap-2

DIOPT Version :10

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:NP_509596.1 Gene:gap-2 / 181172 WormBaseID:WBGene00001516 Length:1259 Species:Caenorhabditis elegans


Alignment Length:930 Identity:209/930 - (22%)
Similarity:332/930 - (35%) Gaps:265/930 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKRYMFDERDDNNINSPVAVEPSSNNNKMADTREVRIEEQLKVKIG-EAKNLSSRNAANTSCSTQ 68
            :||..|.:.|.:......|.:|||::|            .|:...| .|:.|...:..|.|...:
 Worm    64 EKRVSFKDLDMSGRLPVTAQQPSSSSN------------HLRTGGGLHARKLHRCDTGNMSLLER 116

  Fly    69 GTRDVYCTIALDQEEICRTPTIERTLTP--FFGEEH----QFKIPRRFRYLTIYLWDRDMKQDKP 127
                     .|.:|.:.....|.:...|  .:...|    |.:..|.|:        ||.:.:..
 Worm   117 ---------YLSRENMHTPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQ--------RDQRNENA 164

  Fly   128 IGKIAIKREELHMYNHKDHWFS--LRPVDQDSEVQGMVNVEVAFTEAQQTQSLSEGIDLGQHTLR 190
            ..:..:.|...|:   .||.||  |.|:.:.........:.:...:|...::.|.|..:|..:| 
 Worm   165 SIRKRLSRSCDHL---SDHNFSPRLPPIRRKPTKHVPSTLSLVIHDAIHDETNSGGAQVGGESL- 225

  Fly   191 HHQNLPHHSHQQRAHLNDYKENSELSNIQRASAAAA--------SSSSAAMTLKTRAAGLFGHVH 247
                             |.:..|..|...|.:..|:        ..||::..|.||.:|...:::
 Worm   226 -----------------DRRGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLN 273

  Fly   248 HPPSQTQHFPIINTTSTSSDQLSNWKSHGRFVGVTIKVPACVDLAKKQGTCDPFVVCTAHYSNKH 312
            . |:....|||:...:..||.    .:.||...:..:               ||         :.
 Worm   274 Q-PTNAYGFPIVPPANNPSDS----SASGRIANLLSR---------------PF---------RS 309

  Fly   313 QVTRRTKQRKKTVDPEFDEAMYFDLHIDADAGSTNTTGSN-----------------------KS 354
            ...:|||...| ::....||....|| ..||.:|.:..|:                       :|
 Worm   310 NPLKRTKSVSK-MEKSLAEANQHSLH-RVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRACRS 372

  Fly   355 AGSLESSA--------NKGYSIYPVGGADLVEI-----VVSVWH--------------------- 385
            ..||.|||        |:...::|| ...:.|:     :.|.::                     
 Worm   373 HESLLSSAHSTHMIELNEDNRLHPV-HPSIFEVPNCFRLASTYYSCRTPLERAKWMENLRKTMNP 436

  Fly   386 -----------------DAHG------------------------AMSDKVFLGE-VRLPMLNKQ 408
                             :|.|                        |.:|.||.|| ....||.|.
 Worm   437 RRDQQRRTENSMLIWILEAKGLPAKRKYYCEMTLDKTLYAKTSSKARTDNVFWGENFEFMMLPKI 501

  Fly   409 EQQAVN------------------------------PSAWYYLQPRSMTHSSRSLNATPRSCATP 443
            ::..|:                              ...||      ..::|.|.:.|.|..:..
 Worm   502 DEVCVSLFRESDSKKKKDTLIGYVTIGIDQLSSRSPVERWY------TVNTSHSDSGTSRIASAL 560

  Fly   444 PGTRLSVDSTIGSLRLNLNYTADHVFPLATYDDLMNLLLESVDQRPITVSAVSILGELVSGKTEV 508
            .|...|.:|.  |||:...:.:.|:.||..||:|:..|  ..:..|:......:|.  |..|.::
 Worm   561 GGKSSSQESP--SLRIKARWQSVHILPLRAYDNLLETL--CYNYLPLCEQLEPVLN--VRDKEDL 619

  Fly   509 AQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLVSKMMDEAMRLSGLHYLHQTLRPV 573
            |..|||:..........:..|...|:..|.:...:||||||.:|.|:..|:|....||..||...
 Worm   620 ATSLVRVMYKHNLAKEFLCDLIMKEVEKLDNDHLMFRGNTLATKAMESFMKLVADDYLDSTLSDF 684

  Fly   574 LSQIVAEKKPCEIDPSKIKD--RSAVDTNLHNLQDYVERVFEAITKSADRCPKVLCQIFHDLREC 636
            :..::..:..||:||.|:.:  .|:::.|...|..|||..:..|..:..:.||.|..:|..|| |
 Worm   685 IKTVLQCEDSCEVDPQKLGNVSNSSLEKNRALLMRYVEVAWTKILNNVHQLPKNLRDVFSALR-C 748

  Fly   637 AGEHFPSNRE-VRYSVVSGFIFLRFFAPAILGPKLFDLTTERLDAQTSRTLTLISKTIQSLGNLV 700
            ..|  ..||| :..:::|..|||||..||||.|.||:|.:|......:|.||||:||:|:|.|. 
 Worm   749 RLE--AQNREALADTLISSSIFLRFLCPAILSPSLFNLVSEYPSPTNARNLTLIAKTLQNLANF- 810

  Fly   701 SSRSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVISTPSHASSSVHPAAAA---------ATP 756
             |:...:....||..|...:   |.|  .:|.||..||:.|.:....:..|..         ||.
 Worm   811 -SKFGGKEPHMEFMNEFVDR---EWH--RMKDFLLRISSESKSGPEKNADAIVDAGKELSLIATY 869

  Fly   757 LEPV---LLKEGLMTKYPTS 773
            ||..   ||:|....|:|.|
 Worm   870 LEEAWTPLLQEKNGNKHPLS 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046 24/133 (18%)
C2B_RasA3 280..462 CDD:175977 49/310 (16%)
RasGAP_GAP1_like 473..740 CDD:213330 88/269 (33%)
PH_GAP1-like 763..867 CDD:269950 4/11 (36%)
BTK 862..897 CDD:128417
gap-2NP_509596.1 PH-like 302..494 CDD:473070 33/218 (15%)
C2_SynGAP_like 436..586 CDD:175980 25/157 (16%)
RasGAP_DAB2IP 577..905 CDD:213338 103/327 (31%)
Blue background indicates that the domain is not in the aligned region.

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