DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and rasa4

DIOPT Version :10

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:XP_017947086.1 Gene:rasa4 / 100488193 XenbaseID:XB-GENE-487134 Length:803 Species:Xenopus tropicalis


Alignment Length:994 Identity:256/994 - (25%)
Similarity:411/994 - (41%) Gaps:248/994 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LKVKIGEAKNLSSRNAANTSCSTQGTRDVYCTIALDQEEICRTPTIERTLTPFFGEEHQFKIPRR 109
            |.::|.|.|||.:::..       |:.|.||.:.:|.|.|.||.|:.:||:||:|||::..:|..
 Frog     7 LFIRIVEGKNLPAKDIT-------GSSDPYCIVKIDDETIIRTATVWKTLSPFWGEEYKVHLPPN 64

  Fly   110 FRYLTIYLWDRD-MKQDKPIGKIAIKREEL--HM--YNHKDHWFSLRPVDQDSEVQGMVNVEVAF 169
            |..::.|:.|.| :.:|..|||:.:.|..|  |.  ||   .|.:|..:|.|.||||.:::::..
 Frog    65 FHSVSFYVMDEDALSRDDVIGKVCLTRNVLAEHPKGYN---GWMNLTEIDPDEEVQGEIHLKIEI 126

  Fly   170 TEAQQTQSLSEGIDLGQHTLRHHQNLPHHSHQQRAHLNDYKENSELSNIQRASAAAASSSSAAMT 234
            .                     :.|||.                                     
 Frog   127 I---------------------NTNLPR------------------------------------- 133

  Fly   235 LKTRAAGLFGHVHHPPSQTQHFPIINTTSTSSDQLSNWKSHGRFVGVTIKVPACVDLAKK--QGT 297
             |.|...|...                                            |||:|  .|.
 Frog   134 -KVRCTVLEAR--------------------------------------------DLARKDRNGA 153

  Fly   298 CDPFVVCTAHYSNKHQVTRRTKQRKKTVDPEFDEAMYFDLHIDADAGSTNTTGSNKSAGSLESSA 362
            .||||  ...|::|.|   .:...||:..|.::||..|||.                    |:..
 Frog   154 SDPFV--RVQYNSKVQ---ESSVVKKSCYPRWNEAFEFDLE--------------------ETIT 193

  Fly   363 NKGYSIYPVGGADLVEIVVSVWHDAHGAMSDKVFLGEVRLPMLNKQE-QQAVNPSAWYYLQPRSM 426
            .|              :.:.||.  ...:|...|||:|   ::|... |..:....|:.|     
 Frog   194 EK--------------LSIEVWD--WDLVSRNDFLGKV---VINLNGLQTTLQEEEWFRL----- 234

  Fly   427 THSSRSLNATPRSCATPPGTRLSVD-STIGSLRLNLNYTADHVFPLATYDDLMNLLLESVDQ--R 488
                     :|..|      :.|:| ..:|||:|.:....:.|.|...|..|:.||.:.|..  :
 Frog   235 ---------SPGKC------KASIDEGNLGSLQLQVRLRDETVLPSEYYKPLVQLLCQEVKTSCK 284

  Fly   489 PITVSAVSILGELVSG--KTEVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLVS 551
            ..:|:.:|::.:..|.  :.|||..||:||........::..|...|:....:|.|:||.|:|.|
 Frog   285 EKSVNLISLIDDTASAECRQEVATNLVKLFLGQGIAKELLDLLFRLELDKTNEPNTLFRSNSLAS 349

  Fly   552 KMMDEAMRLSGLHYLHQTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTNLHN------------- 603
            |.|:..::::|..|||..:.|.:::|..|||..|:||||::.:.|..:.||.             
 Frog   350 KSMESFLKVAGTQYLHSVVGPTINRIFEEKKYVELDPSKVEIKEAGCSGLHRIQTEGELIQQSTQ 414

  Fly   604 -LQDYVERVFEAITKSADRCPKVLCQIFHDLRECAGEHFPSNR--EVRYSVVSGFIFLRFFAPAI 665
             ||.|:..:..:||||...||..:...|..|.:...|.||.|:  .|::..|:.|:.||||:|||
 Frog   415 YLQSYLTDLLLSITKSVKLCPATIRATFRQLYKRVEERFPENKHMNVKFIAVTSFLCLRFFSPAI 479

  Fly   666 LGPKLFDLTTERLDAQTSRTLTLISKTIQSLGNLVSSRSSQQTCKEEFTVELYKKFCTEQHVDAV 730
            :.||||.|..:..||:|||||.|::|.||::||:.:..|   ..||.:...|..|.  :|.|..:
 Frog   480 MSPKLFHLREKHADARTSRTLLLLAKAIQNVGNMDAPAS---RAKESWMAPLQPKI--QQGVLQL 539

  Fly   731 KHF-LEVISTPSHASSSVHPAAAAATPLEPVLLKEGLMTKYPTSRKRF--GRQFKQRHFRLTTHS 792
            |.| :::|.........:..|....:|    .:|||.:..|.|..|.:  ...||:....||..:
 Frog   540 KEFIIKLIDIEEKEELDLERALNLQSP----TIKEGQLMIYKTKGKGYLLASSFKKFFITLTPDA 600

  Fly   793 LSYAKSKGKQPICDIPLQEIASVEQLKDKSFKMQNCFKIVHND-----RSLIVQTTNCVEEREWF 852
            ||:|||...:....|||.:|.::|::::|.|...|..:|::.|     .:|.:|..:..|..:|.
 Frog   601 LSFAKSSYSKKSSVIPLSKIRALEKVEEKCFGSSNVMQIIYTDETENLEALYLQCKSVNELNQWL 665

  Fly   853 DLLHKICLMNSIRMQYFHPSAFVSGFYSCCGRSDENSPGCKKVLDKTMDYFQMDLVTALDPALDL 917
            ..|.|:|:.|...:..:||..|....:|||.:.|:...||.|...:.......||   |||.|:.
 Frog   666 SALRKVCVNNPDMLCSYHPGVFKGEKWSCCHQKDKAGAGCDKTRHEVTLQEWNDL---LDPDLEA 727

  Fly   918 QRIHTLIMSNMSVLESLLDPLTYHQSLSQTQHQQHNPLVPLATDLQKHSPQAF------------ 970
            |.|...::....:::.     .|.|...||..:  .||:.....::..:.|.|            
 Frog   728 QLIFRHLLGVRELMKE-----KYVQWTEQTDRE--TPLLHSDPQVKDSAAQLFQILHDLEAAHDS 785

  Fly   971 -AEFKRTIEKLREKAYAID 988
             ..|....:|  ||.|.::
 Frog   786 LTVFSNVADK--EKKYLLE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046 45/128 (35%)
C2B_RasA3 280..462 CDD:175977 41/185 (22%)
RasGAP_GAP1_like 473..740 CDD:213330 96/287 (33%)
PH_GAP1-like 763..867 CDD:269950 33/110 (30%)
BTK 862..897 CDD:128417 11/34 (32%)
rasa4XP_017947086.1 C2A_Rasal1_RasA4 6..126 CDD:176018 45/128 (35%)
C2 134..256 CDD:472691 44/229 (19%)
RasGAP_RASA4 264..550 CDD:213343 97/290 (33%)
PH_CAPRI 542..681 CDD:241523 37/142 (26%)
BTK 681..710 CDD:459937 10/28 (36%)

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