DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc4 and UBE2W

Sequence 1:NP_001287013.1 Gene:Ubc4 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001001481.3 Gene:UBE2W HGNCID:25616 Length:162 Species:Homo sapiens

Alignment Length:140 Identity:44/141 (31%)
Similarity:78/141 (55%) Gaps:17/141 (12%)


  Fly     1 MANMAVS--RI-----KREFKEV--MRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKF 56
            ||:|..:  |:     ||..||:  ::::.....::..:.|.:|.|:...::.|.|.|.|||.||
Human     1 MASMQTTGRRVEVWFPKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKF 65

  Fly    57 VLEIKVPETYPFNPPKVRFITR--IWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAA 119
            .|..|....|||:.|:|.|...  ..||::.| .|.|||.||.::|:.|:::::|.||:.::|::
Human    66 QLLFKFSSRYPFDSPQVMFTGENIPVHPHVYS-NGHICLSILTEDWSPALSVQSVCLSIISMLSS 129

  Fly   120 AE-----PDD 124
            .:     ||:
Human   130 CKEKRRPPDN 139

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc4NP_001287013.1 COG5078 1..153 CDD:227410 44/141 (31%)
UQ_con 8..149 CDD:278603 41/132 (31%)
UBA_II_E2_UBCD4 163..198 CDD:270574
UBE2WNP_001001481.3 UQ_con 18..159 CDD:306648 39/124 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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