DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and ube2ka

DIOPT Version :10

Sequence 1:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001013500.1 Gene:ube2ka / 541355 ZFINID:ZDB-GENE-050320-48 Length:200 Species:Danio rerio


Alignment Length:199 Identity:134/199 - (67%)
Similarity:163/199 - (81%) Gaps:0/199 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPET 65
            |||:||.|||||||||::|||..:..||::||::::||||||||||||||||||::.||||:|||
Zfish     1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPET 65

  Fly    66 YPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130
            ||||||||||||:|||||||||||||||||||..|||||||||||||||||||||||||||||||
Zfish    66 YPFNPPKVRFITKIWHPNISSVTGAICLDILKGQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130

  Fly   131 AYQFKDKYDLFLLTAKHWTNAYAGGPHTFPDCDSKIQRLRDMGIDEHEARAVLSKENWNLEKATE 195
            |.|:|...::|..||:.|::..||.|.:.|:...||.:|..||.|::.....||.::|::|.|||
Zfish   131 ANQYKQNPEMFKQTARLWSHVCAGAPVSSPEYTRKIDKLCAMGFDKNAVIVALSSKSWDVEAATE 195

  Fly   196 GLFS 199
            .|.|
Zfish   196 LLLS 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 111/144 (77%)
UBA_II_E2_UBCD4 163..198 CDD:270574 13/34 (38%)
ube2kaNP_001013500.1 UBCc_UBE2K 6..151 CDD:467420 111/144 (77%)
UBA_like_SF 163..200 CDD:473871 15/37 (41%)

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