DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Ubc4 and Ube2e1

Sequence 1:NP_001287013.1 Gene:Ubc4 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_033481.1 Gene:Ube2e1 MGIID:107411 Length:193 Species:Mus musculus

Alignment Length:156 Identity:64/157 (41%)
Similarity:89/157 (57%) Gaps:10/157 (6%)


  Fly     1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPET 65
            :.:.:..||::|..:: ..:....||...:  .|:..|.|..|.|||.:.||||.|.|:|.....
Mouse    44 LLSTSAKRIQKELADI-TLDPPPNCSAGPK--GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPE 105

  Fly    66 YPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130
            |||.||||.|.|||:|.||:| .|.||||||||||:.|:|:..||||:.:||....|.||....:
Mouse   106 YPFKPPKVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSI 169

  Fly   131 AYQF---KDKYDLFLLTAKHWTNAYA 153
            |.|:   :.::|..   |:.||..||
Mouse   170 ATQYMTNRAEHDRM---ARQWTKRYA 192

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ubc4NP_001287013.1 COG5078 1..153 CDD:227410 63/155 (41%)
UQ_con 8..149 CDD:278603 61/144 (42%)
UBA_II_E2_UBCD4 163..198 CDD:270574
Ube2e1NP_033481.1 UQ_con 51..188 CDD:333904 61/144 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5078
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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