DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18179 and Ctrb1

DIOPT Version :10

Sequence 1:NP_648340.1 Gene:CG18179 / 39124 FlyBaseID:FBgn0036023 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:276 Identity:88/276 - (31%)
Similarity:134/276 - (48%) Gaps:39/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLLTLSVALAVVAASPGFNRTSLLPQVTISEGAEGRIVNGYPAPEGKAPYIVGLLIRTDGSNSAA 68
            ||..|| ..|:|.|:.|....::.|.:|    ...|||||..|..|..|:.|.|..:| |.:.. 
  Rat     3 FLWLLS-CFALVGATFGCGVPTIQPVLT----GLSRIVNGEDAIPGSWPWQVSLQDKT-GFHFC- 60

  Fly    69 VGAGTIIASDWILTAAHC--LTTDYVEIHYGSNWGWNGAFRQSVRRDNF--------ISHPNWPA 123
              .|::|:.||::|||||  .|:|.|..         |.|.|....:|.        ..:|.:..
  Rat    61 --GGSLISEDWVVTAAHCGVKTSDVVVA---------GEFDQGSDEENIQVLKIAQVFKNPKFNM 114

  Fly   124 EGGR-DIGLIR--TPSVGFTDLINKVALPSFSEESDRFVDTWCVACGWGGMDNGNL--ADWLQCM 183
            ...| ||.|::  ||: .|::.::.|.||:.  :.|....|.|...|||......|  .:.||..
  Rat   115 FTVRNDITLLKLATPA-QFSETVSAVCLPNV--DDDFPPGTVCATTGWGKTKYNALKTPEKLQQA 176

  Fly   184 DVQIISNSECEQSYGTVASTDMCTRRTDGKSSCGGDSGGPLVTHDNA--RLVGVITFGSVDCH-S 245
            .:.|:|.::|::|:|:..:..|......|.|||.||||||||...:.  .|.|::::||..|. |
  Rat   177 ALPIVSEADCKKSWGSKITDVMICAGASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGVCSTS 241

  Fly   246 GPSGYTRVTDYLGWIR 261
            .|:.|:|||..:.|::
  Rat   242 TPAVYSRVTALMPWVQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18179NP_648340.1 Tryp_SPc 40..263 CDD:238113 77/240 (32%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 77/240 (32%)

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