DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or67a and Or56a

DIOPT Version :10

Sequence 1:NP_524005.2 Gene:Or67a / 39109 FlyBaseID:FBgn0036009 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:432 Identity:81/432 - (18%)
Similarity:171/432 - (39%) Gaps:118/432 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LRLAVKF--YNTL--GIDPYETGRKRTIWFQIYFALNMFNMVFSFYAEVATLVDRLR-------- 71
            |.||..|  |..|  |...|.|..:       |||:::  .:|:.|.:...::..||        
  Fly    60 LMLARVFRGYENLNDGATSYATAVQ-------YFAVSI--AMFNAYVQRDKVISLLRVAHSDIQN 115

  Fly    72 -----DN---------ENFLESCILLSYVSFVVMGLSKIGAVMKKKPKMTALVRQL---ETCFPS 119
                 ||         :.:..:..||.::..|:.||....         ..:.|.|   ::.|..
  Fly   116 LMHEADNREMELLVATQAYTRTITLLIWIPSVIAGLMAYS---------DCIYRSLFLPKSVFNV 171

  Fly   120 PSAKVQEEYAVKSWL-----KRCHIYTKGFGGLFMIMYFAHALIPLFIYFIQRVLLHYPDAKQIM 179
            |:.:..||:.:..:.     :.|..:..|:.|.:..:......|||:..|| ..|:.|.:.|..:
  Fly   172 PAVRRGEEHPILLFQLFPFGELCDNFVVGYLGPWYALGLGITAIPLWHTFI-TCLMKYVNLKLQI 235

  Fly   180 PFYQLEPWEFRDSWLFYPSYFHQSSAGYTATCGSIAGDLMIFAVVLQVIMHYERLAKVLREFKIQ 244
            ...::|..:..                      .:...|:|..:....:..::  .::.:||   
  Fly   236 LNKRVEEMDIT----------------------RLNSKLVIGRLTASELTFWQ--MQLFKEF--- 273

  Fly   245 AHNAPNGAKEDIR------KLQSLVANHIDILRLTDLMNEVFGIPLLLNFIASALLVCLVGVQLT 303
                   .||.:|      :||.|:.                 :|::.:||..::|:|.:...||
  Fly   274 -------VKEQLRIRKFVQELQYLIC-----------------VPVMADFIIFSVLICFLFFALT 314

  Fly   304 IALSPE---YFCKQMLFLISVLLEVYLLCSFSQRLIDASENVGHAAYDMDWLGSDKRFKKILIFI 365
            :.:..:   :|....||:::.:|.:|..  .:..:::..:.:..|.:...|...:...:|:|:|:
  Fly   315 VGVPSKMDYFFMFIYLFVMAGILWIYHW--HATLIVECHDELSLAYFSCGWYNFEMPLQKMLVFM 377

  Fly   366 SMRSQKPVCLKATVVLDLSMPTMSIFLGM-SYKFFCAVRTMY 406
            .|.:|:|:.::|.:| ||::.|. |.:|. :|.:|..:|:.:
  Fly   378 MMHAQRPMKMRALLV-DLNLRTF-IDIGRGAYSYFNLLRSSH 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or67aNP_524005.2 7tm_6 75..396 CDD:251636 60/338 (18%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 60/345 (17%)

Return to query results.
Submit another query.