DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and AT3G56200

DIOPT Version :10

Sequence 1:NP_648327.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_191179.1 Gene:AT3G56200 / 824786 AraportID:AT3G56200 Length:435 Species:Arabidopsis thaliana


Alignment Length:452 Identity:88/452 - (19%)
Similarity:162/452 - (35%) Gaps:104/452 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PQEMEQFLPGEGKVMYKIQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLTHLLKASLGTGIL 77
            ||.....||       |.:|..|:.                  |.::.:..:.::..:.:|.||:
plant     3 PQIKTHLLP-------KQEPSSSEN------------------HGSSTSGIVFNVSTSIIGAGIM 42

  Fly    78 GMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWC 142
            .||.||...|::.........|::.|      :..|..:.........|:|.:.:.:|.|     
plant    43 SMPAAFKVLGIVPAFLIITIIAWLST------ISVGFLMKSTLAGESTTYAGVMKESFGK----- 96

  Fly   143 RGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNF---------------EQLISYWTGTAV-SLR 191
                 ....::.....:..||...::::|:....               |...|||..|.: :|.
plant    97 -----TGSIAVQIATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQEWFGSYWWNTRIFALL 156

  Fly   192 MLICIMLVPLILIAWVPNLKYLAPVS-MVANVFMGLGLGITFYYLVQD------LPPVEERESVV 249
            .:...:|:||:|...|..|...:.|| ::|.:|:.:...:....||..      |.|........
plant   157 FVYGFVLLPLVLRRRVERLAISSAVSFLLAVLFVVISSVLAISALVNGQTKNPRLFPELSNGGSF 221

  Fly   250 WSTLPQFFS-----ITIFAMEAIGVVMPLENNMKTPQSFLG-------ICGVLSQGMSGVTLIYM 302
            |    |.|:     :|.|....  .|.|:...:|.|...:.       :|..          ||.
plant   222 W----QLFTASPVIVTAFTFHF--NVHPIGFELKDPLQVIPATKISVILCAA----------IYF 270

  Fly   303 LLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKC-- 365
            ..|..|||.:|.||...|.:|  .::....::..|::..|..::.|...:...::...::...  
plant   271 ATGLFGYLLFGDATMSDILVN--FDQSSGSSIGSLLNDIVRLSYVLHLMLVFPLLNFSLRANLDE 333

  Fly   366 ---KKRPTLVNYVLRTVLVTAAVVL-----AVAVPTIGPFMGLIGAFCFSILGLIFPVVIEL 419
               .|:|:|.....|.:.:|.|:::     |:|||.|..|...:|:.....:..|||..|.|
plant   334 LLYPKKPSLEKDTKRFIGLTLALLICCFLSAIAVPDIWYFFQFMGSTITVSIAFIFPAAIVL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_648327.1 SLC5-6-like_sbd 56..456 CDD:444915 81/409 (20%)
AT3G56200NP_191179.1 SLC5-6-like_sbd 21..426 CDD:444915 81/409 (20%)

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