DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and stam

DIOPT Version :10

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_989237.1 Gene:stam / 394846 XenbaseID:XB-GENE-482429 Length:541 Species:Xenopus tropicalis


Alignment Length:580 Identity:130/580 - (22%)
Similarity:200/580 - (34%) Gaps:193/580 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 STPVGQRIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTLT 79
            |.|....:|.||.....:|:|...:::||.:.:|....:|.:|:|.:|::.   |:..|.|..||
 Frog     6 SNPFDPDVEKATSELNTAEDWGLILDLCDKVGQSRTGPKDCLRSIMRRVNH---KDPHVAMQALT 67

  Fly    80 VLETCVKNCGKAFHVLVAQKDFINELVKLIGPKNDPPAAMQEKVLSLIQIWADAFKNQPDLNGVT 144
            :|..||.||||.||:.|..:||.:|:..::. |..|...  ||:.:|:..|||.|||.|.|:.::
 Frog    68 LLGACVSNCGKIFHLEVCSRDFASEVSSVLN-KGHPKVC--EKLKALMVEWADEFKNDPQLSLIS 129

  Fly   145 QMYMELKNKGIEFPANDLDAMAPIYTPQRSVPEMPPQLVAAQQHTISPQHMAAAAAAA------- 202
            .|...||.:|:.|||        :.:......:..|.|||....|.:.:......|.|       
 Frog   130 AMIKNLKEQGVTFPA--------VGSQAADQAKASPALVAKDPGTAATKKEEEDLAKAIELSLKE 186

  Fly   203 -----AAAAAPPSTGPLH-LTPE----QA------------------------------------ 221
                 ..:...||:..|. |.||    ||                                    
 Frog   187 QKQQSTVSGLYPSSSLLSALKPEGRKVQAIYDFEAAEDNELTFKAGDIVTVLDDSDPNWWKGETN 251

  Fly   222 ------------AKLRSELEIV----------------------------SNNMSILSEMLSVLK 246
                        |.|.:|||::                            .:.|..|.:||....
 Frog   252 EGIGLFPSNFVTADLTAELEMIKTEKKTVQFSDEVQVETIEPEPEPVYIDEDKMDHLLQMLQSAD 316

  Fly   247 PGQESPDDYALLNELTSTCKEMQSRIVDLIGRVQDDEL----------------TAEFLRINDEL 295
            |....||...||: |.:.|.:|        |.:.|::|                ..|.|.:..:|
 Frog   317 PTDGLPDPTDLLH-LEAACHQM--------GPLIDEKLEDIDRKHPELSELNVKVMEALSLYTKL 372

  Fly   296 NNVFLRHQRYEKNRSQG---QGAGVTSPSAVLG------------AAMG-----------LPGVG 334
            .|....:..|.|.::|.   |.|.|....:..|            |.||           ||.: 
 Frog   373 MNEDPMYSMYAKMQNQQFYMQSAAVPPQQSYQGPHPNAAYLVTGNAQMGHIQTYPIPTEQLPSL- 436

  Fly   335 AAGAGATTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLPQSLGQISL---GGGAPI---- 392
              ..||     :|.|.:....|.:||:......:..:.....:.|:.|. ||   ...|||    
 Frog   437 --NQGA-----VPHPASNELPSQSPQASYNTTVISSTPGNLYMNQATGH-SLNPAASAAPIDITA 493

  Fly   393 ---GVQRSARPADEF-DMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKPNQPQQ 448
               |:....:|...| ..|.:|::...|.|:|:               |.....||.|.|
 Frog   494 YQNGIGAPQQPLWHFTTCLNKSQSSLQHTSELI---------------TMMCNHPNDPSQ 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1_like 17..154 CDD:340768 47/136 (35%)
GAT_TOM1_like 222..307 CDD:410581 25/128 (20%)
stamNP_989237.1 VHS_STAM1 9..139 CDD:340797 46/135 (34%)
SH3_STAM1 211..265 CDD:212897 2/53 (4%)
GAT_STAM1 299..375 CDD:410594 18/84 (21%)

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