DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and Gga

DIOPT Version :10

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster


Alignment Length:554 Identity:112/554 - (20%)
Similarity:219/554 - (39%) Gaps:107/554 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QRIEAATDANLASENWAANMEICDMINESSDTARDAMRAI-RKRLSQNAGKNNQVVMYTLTVLET 83
            :.:|.||:.....:.....| .|.::..::.....|...| .|..|.|..:..:.:    ::||.
  Fly    10 EMLERATNPAQKIDELGVQM-FCIVVKSNAQLVHKAQEMIVAKVRSTNVTEATRAI----SLLEE 69

  Fly    84 CVKNCGKAFHVLVAQKDFINELVKLIGPK---NDPPAAMQEKVLSLIQIWADAFKNQPDLNGVTQ 145
            |:..||..|....::..|:|||::|:..|   .:.|..::::::..:.:|...|   |....:..
  Fly    70 CMTQCGDDFQDEASKFRFLNELIRLVSKKYKGAETPHEVKQRIMECLLLWTTEF---PQRQKIRD 131

  Fly   146 MYMELKNKG-IEFPANDLDAMAPIYTPQRSVPE-MPPQLVAAQQHTISPQHMAAAAAAAAAAAAP 208
            .|..|:.:| ||....:. |:|...:...::.| |..:|:.:.    :|::...|........|.
  Fly   132 AYDMLRKEGDIEHGTTEA-AVAKRESVLGTIDEAMFAKLIKSN----NPENFKRANLLLQYRMAQ 191

  Fly   209 PSTGPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNELTSTCKEMQSRIV 273
            .:.     ..:..|:.|..|..|...|.:|::||....|..:  |....|:||..:||: ...|.
  Fly   192 EAR-----RNDLLAQHRLVLCEVQETMQLLNQMLDTYDPANQ--DVSETLHELYKSCKK-HKPIF 248

  Fly   274 DLIGRVQDD---ELTAEFLRINDELNNVFLRHQRYEKNRSQGQGAGVTSPSAVLGAAMGLPGVGA 335
            ..:.::.||   :|.|:.|..|..|.....|::....:.::...|.:|:.:..:.:::      .
  Fly   249 QHLPQLLDDSDAQLVADTLDANCALLATMQRYKLLVPSPTRSTAAALTTSAPTVASSV------K 307

  Fly   336 AGAGATTVATLPPPPTTTAVSNTPQSDQLLID-LIESSEEA--QLPQSLGQISLGGGAPIG---- 393
            :.|.:||        .||:.:|....::||.| ||:.|.:|  ....||...:..|..|:.    
  Fly   308 STASSTT--------ATTSSNNAQLLNELLGDLLIDGSNKAATTATTSLPNAAASGSNPLADLSD 364

  Fly   394 ----------VQRSARPAD------EFDMLAQSRT-----DGNHKS-----DLLRDIPSVDAAAG 432
                      .::.::|..      |..:::|..|     :||..|     :.:|.:|.:|..:.
  Fly   365 IFSSALAESEAKQQSQPFQNATTLLEPQVISQGTTTEALANGNGGSASKVPETIRKMPQIDMLSE 429

  Fly   433 SVTATASPYKPNQPQQAQRSAGEPPVVSKSTKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEE 497
            .:.....|.:...|...:    :|..::.:....|         ..||:..||.|::        
  Fly   430 ELFQQILPTQDRMPSFKR----DPEKITLNDLARE---------RMHIKAPEEPTTA-------- 473

  Fly   498 RAAAAENLPTISASNSAASATTGSAGADSLRKTP 531
                  |.|   ||:||.:..|.:|..||:...|
  Fly   474 ------NDP---ASDSAPAIATATATVDSIDDVP 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1_like 17..154 CDD:340768 28/137 (20%)
GAT_TOM1_like 222..307 CDD:410581 24/87 (28%)
GgaNP_572571.1 VHS_GGA_metazoan 8..144 CDD:340769 30/141 (21%)
GAT_GGA_meta 201..283 CDD:410582 23/84 (27%)
Alpha_adaptinC2 543..644 CDD:197886
Blue background indicates that the domain is not in the aligned region.

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