DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and GGA1

DIOPT Version :10

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001350700.1 Gene:GGA1 / 26088 HGNCID:17842 Length:656 Species:Homo sapiens


Alignment Length:564 Identity:129/564 - (22%)
Similarity:221/564 - (39%) Gaps:103/564 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVVMYTL------- 78
            ||..||:......:||:....|:.:||..:....|.|.:..:: |:..:...:...|:       
Human    13 RINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKI-QSPQEWEAIQALTVRRGEATI 76

  Fly    79 --------TVLETCVKNCGKAFHVLVAQKDFINELVKLIGPK---NDPPAAMQEKVLSLIQIWAD 132
                    .|||||:|:|||.||..|.:..|:|||:|::.||   :.....::.|:|.|:..|..
Human    77 RPPPCDDTKVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 141

  Fly   133 AFKNQPDLNGVTQMYMELKNKGI--EFPANDLDAMAPIYTPQ-RSV---PEMPPQLVAAQQHTIS 191
            ..   |:...:.:.|..||.:||  ..|....|...|:..|: ::|   .|...:::|....:..
Human   142 GL---PEEVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPRPKNVIFEDEEKSKMLARLLKSSH 203

  Fly   192 PQHMAAAAAAAAAAAAPPSTGPLHLTPEQAAKLRSELEIVSNNMSILSEM-LSVLKPGQESPDDY 255
            |:.:.||.............     ..|:.:|..:.:|.|:||:.:|:|| :|..:.|..:....
Human   204 PEDLRAANKLIKEMVQEDQK-----RMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSE 263

  Fly   256 ALLNELTSTCKEMQSRIVDLIGRVQD-DELTAEFLRINDELNNV------FLRHQRYEKNRSQGQ 313
            .|:.||...|:.|:..:..|....:| ||..||.|:.||.|..|      .:|.:....:.:.|.
Human   264 DLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDATAGS 328

  Fly   314 GAGVTSPSAVLGAAMGLPGVGAAGAGATTVATLPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLP 378
            ..|.||      |.:.|.|:....|| ||...:|..|...|....|.:...|:|           
Human   329 IPGSTS------ALLDLSGLDLPPAG-TTYPAMPTRPGEQASPEQPSASVSLLD----------- 375

  Fly   379 QSLGQISLGGGAPIGVQRSARPADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYKP 443
            ..|..:.|....|        |:.                      ||:|....:...::...:|
Human   376 DELMSLGLSDPTP--------PSG----------------------PSLDGTGWNSFQSSDATEP 410

  Fly   444 NQPQQAQRSAGE--PPVVSKSTKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEERAAAAENLP 506
            ..|..||..:.|  ||..:.....:.:|:::. ||.:.   :::....|..:...|:......|.
Human   411 PAPALAQAPSMESRPPAQTSLPASSGLDDLDL-LGKTL---LQQSLPPESQQVRWEKQQPTPRLT 471

  Fly   507 TISASNSAASATTGSAGADSLRKT--------PKKPGAEEDLLA 542
            .....|.::|.::.|:.|.||..|        |::|...|..||
Human   472 LRDLQNKSSSCSSPSSSATSLLHTVSPEPPRPPQQPVPTELSLA 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1_like 17..154 CDD:340768 40/150 (27%)
GAT_TOM1_like 222..307 CDD:410581 27/92 (29%)
GGA1NP_001350700.1 VHS_GGA1 9..164 CDD:340806 42/154 (27%)
GGA_N-GAT 186..224 CDD:465702 5/42 (12%)
GAT_GGA1_GGA2 227..315 CDD:410586 26/87 (30%)
Alpha_adaptinC2 534..648 CDD:197886
Blue background indicates that the domain is not in the aligned region.

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