DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3529 and tom1l2a

DIOPT Version :10

Sequence 1:NP_648315.1 Gene:CG3529 / 39093 FlyBaseID:FBgn0035995 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001338606.2 Gene:tom1l2a / 100535615 ZFINID:ZDB-GENE-250213-1 Length:506 Species:Danio rerio


Alignment Length:566 Identity:232/566 - (40%)
Similarity:309/566 - (54%) Gaps:96/566 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGNVFSTPVGQRIEAATDANLASENWAANMEICDMINESSDTARDAMRAIRKRLSQNAGKNNQVV 74
            |||.:||||||.||.|||.:|.:|:|..||||||:|||:.:..||||||::|||  |..:|.:.|
Zfish     5 LGNPYSTPVGQCIEKATDGSLQNEDWTLNMEICDIINETEEGPRDAMRAVKKRL--NGNRNFREV 67

  Fly    75 MYTLTVLETCVKNCGKAFHVLVAQKDFI-NELVKLIGPKNDPPAAMQEKVLSLIQIWADAFKNQP 138
            |..||||||||||||..|||.||.:||| ..:||:|.|||:|||..|:|||:|||.|||||::.|
Zfish    68 MLALTVLETCVKNCGHRFHVHVANRDFIEGVMVKIISPKNNPPAIAQDKVLALIQAWADAFRSSP 132

  Fly   139 DLNGVTQMYMELKNKGIEFPANDLDAMAPIYTPQRSVPEMPP----QLVAAQQHTI---SPQHMA 196
            ||.||..:|.|||.||:|||..||||::||:||||.|||:.|    ....||.||.   ||:..|
Zfish   133 DLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRGVPEVDPGTHRYKAPAQTHTAPESSPKPAA 197

  Fly   197 AAAAAAAAAAAPPSTGPLHLTPEQAAKLRSELEIVSNNMSILSEMLSVLKPGQESPDDYALLNEL 261
            |||..........:.||:...|||.|:|||||:||..|:.::||||:.:.||||...|..||.||
Zfish   198 AAAPVFNNTHIQTAAGPISANPEQIARLRSELDIVRGNIKVMSEMLTEMVPGQEDASDLELLQEL 262

  Fly   262 TSTCKEMQSRIVDLIGRVQDDELTAEFLRINDELNNVFLRHQRYEKNR--SQGQGAGVTSPSA-- 322
            ..||:.||.|||:||.||.::|:|.|.|..||:|||:|||::|||:.|  ...|..||.:.::  
Zfish   263 NRTCRAMQHRIVELISRVSNEEVTEELLHANDDLNNMFLRYERYERYRVGRAAQNNGVLNEASEE 327

  Fly   323 --VLGAAMGLPGVGAAGAGATTVAT-----LPPPPTTTAVSNTPQSDQLLIDLIESSEEAQLPQS 380
              ::....|.|.|.......|...|     :..||...|.::|                |.|...
Zfish   328 DNLIDLGPGSPAVVTPRISTTPTHTHTHTHMQTPPAAPAAADT----------------ASLSTQ 376

  Fly   381 LGQISLGGGAPIGVQRSA---RPADEFDMLAQSRTDGNHKSDLLRDIPSVDAAAGSVTATASPYK 442
            |..:.:...:..|...|.   .|.|:|||.|.:|:  :..::..|::...|..|....|:|...:
Zfish   377 LAGLDVRSDSVSGTLSSLANHNPQDDFDMFAHTRS--SSLAEQRRNVKYEDPQALVGLASALDIR 439

  Fly   443 PNQPQQAQRSAGEPPVVSKSTKENEIDEMEAWLGSSHIEGIEELTSSEFDKFLEERAAAAENL-- 505
                ||.....||.|.                      ||:   :|.|||||||:||.||:.:  
Zfish   440 ----QQNATGKGEEPE----------------------EGV---SSEEFDKFLEDRAKAADQVSP 475

  Fly   506 --------PTISASNSAASATTGSAGADSLRKTPKKPGAEEDLLAL 543
                    |.:|:|:|            |.|||.:   .|::|.||
Zfish   476 LGSPGDPRPPVSSSSS------------SRRKTEQ---MEDNLFAL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3529NP_648315.1 VHS_Tom1_like 17..154 CDD:340768 84/137 (61%)
GAT_TOM1_like 222..307 CDD:410581 47/84 (56%)
tom1l2aNP_001338606.2 None

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