DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp23 and Hspb1

DIOPT Version :10

Sequence 1:NP_523999.1 Gene:Hsp23 / 39077 FlyBaseID:FBgn0001224 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_114176.4 Gene:Hspb1 / 24471 RGDID:61306 Length:206 Species:Rattus norvegicus


Alignment Length:124 Identity:52/124 - (41%)
Similarity:75/124 - (60%) Gaps:14/124 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PYLALVGPMEQQL------RQLEKQVGASSGSSGAVSKIGK--DGFQVCMDVSHFKPSELVVKVQ 90
            |.....||....|      |.|.:|:     ||| ||:|.:  |.::|.:||:||.|.||.||.:
  Rat    60 PAATAEGPAAVTLAAPAFSRALNRQL-----SSG-VSEIRQTADRWRVSLDVNHFAPEELTVKTK 118

  Fly    91 DNSVLVEGNHEEREDDHGFITRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAI 149
            :..|.:.|.||||:|:||:|:|.|.|:|.||||.:...|:|:||.:|.||::.|.|.|:
  Rat   119 EGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTLVSSSLSPEGTLTVEAPLPKAV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp23NP_523999.1 metazoan_ACD 67..145 CDD:107247 36/79 (46%)
Hspb1NP_114176.4 Interaction with TGFB1I1. /evidence=ECO:0000269|PubMed:11546764 74..206 48/110 (44%)
ACD_HspB1_like 88..173 CDD:107230 40/85 (47%)

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