DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp23 and sip-1

DIOPT Version :10

Sequence 1:NP_523999.1 Gene:Hsp23 / 39077 FlyBaseID:FBgn0001224 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_499316.1 Gene:sip-1 / 176471 WormBaseID:WBGene00004798 Length:159 Species:Caenorhabditis elegans


Alignment Length:123 Identity:37/123 - (30%)
Similarity:61/123 - (49%) Gaps:21/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PYYCQRQR--NPYLALVGPMEQQLRQLEKQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVV 87
            ||:.||..  |.:..:|   .|||.::|...               ..|.|.:||:.|||.||.|
 Worm    23 PYWAQRHSMLNNFNNIV---PQQLNEVENTA---------------QKFCVKLDVAAFKPEELKV 69

  Fly    88 KVQDNSVLVEGNHEEREDDHGFITRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPK 145
            .::.:.:.:||:||.: .:|||..|.|.|::.||...:...:.:.::.:|.:||..||
 Worm    70 NLEGHVLTIEGHHEVK-TEHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQMTIDAPK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp23NP_523999.1 metazoan_ACD 67..145 CDD:107247 25/77 (32%)
sip-1NP_499316.1 metazoan_ACD 45..126 CDD:107247 26/96 (27%)

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