DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp23 and hsp30d

DIOPT Version :10

Sequence 1:NP_523999.1 Gene:Hsp23 / 39077 FlyBaseID:FBgn0001224 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_002937646.1 Gene:hsp30d / 100489362 XenbaseID:XB-GENE-5917036 Length:215 Species:Xenopus tropicalis


Alignment Length:192 Identity:55/192 - (28%)
Similarity:86/192 - (44%) Gaps:37/192 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSLADDLGRMSMVPFYEPYYCQRQRNPYLALVGPMEQQLRQLEKQ-----VGASSGSSGAVSKI 66
            :||:.:|:.|...        |..:....|:    .:..:|::..|     ...:.|:|.:..|.
 Frog    39 ILSMRNDMERRMQ--------CVNEAYRLLS----QDMDMRRITDQSRQPRAAETEGTSPSSGKD 91

  Fly    67 GKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDD------HGFITRHFVRRYALPPGYE 125
            |||.|::.:||..|.|.||.||:|...|:|.|..|.:.|.      |.:  |.:.|...||.|..
 Frog    92 GKDHFELTLDVRDFSPHELTVKMQGRRVIVTGKQERKSDSEDGSYFHEY--REWKREAELPEGVN 154

  Fly   126 ADKVASTLSSDGVLTIKVPK---PPAIEDKGNERIVQIQQVGPAHLNVKENPKEAVEQDNGN 184
            .::|..:.|.||.|.|:.|:   |||     .||.:.| .:.||..:.:|.|.:|   .|.|
 Frog   155 PEQVVCSFSKDGHLHIQAPRLALPPA-----PERPIPI-SMDPAPRDAQEIPPDA---QNSN 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp23NP_523999.1 metazoan_ACD 67..145 CDD:107247 30/83 (36%)
hsp30dXP_002937646.1 ACD_HspB9_like 88..174 CDD:107236 31/87 (36%)

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