Protein Alignment Rdl and Gabrq

DIOPT Version :10

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: XP_063136356.1
• Gene: Gabrq / 65187
• RGDID: 68331
• Length: 644
• Species: Rattus norvegicus
• Alignment Length: 354
• Identity: 135/354 - (38%)
• Similarity: 208/354 - (58%)
• Gaps: 26/354 - (7%)

  Fly    59 ISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRK 123
            :..|||....:||.|:|||:||.||.|.:::||.||..:||:.||:|:..:..|.|.|.||||
  Rat   178 VQKILDRVLSTYDVRLRPNFGGAPVPVSISIYVSSIEQISEINMDYTITMFLHQTWKDTRLAY-- 240

  Fly   124 RPGVET---LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASC 185
               .||   |::.....:.:||||.:|||.|.::.|..|..|...::|..|::...||||.||:|
  Rat   241 ---YETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTAENRVFQLHPDGTVQYGIRLTTTAAC 302

  Fly   186 PMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLT 250
            .::||.||||:|.|.:|:||:|||:.||...|.|. :::.::.|:.:||:..||....:.|:...
  Rat   303 SLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDD-NAIHITDELHIPQYTYLGRTITSKEVYFY 366

  Fly   251 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMS 315
            ||:|.||..:.|..|.:..||:|:|.|:.|..|:||:|||:|..::.|||.:|:|::|.:||:.|
  Rat   367 TGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYGSSAARVTIGLTSILVLTTIDS 431

  Fly   316 STNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYM----AKRIQMRKQRFMAIQKIAEQKK 376
            .....||.||.:|:||:|:..|...||.|||||..:.|:    |.|...|:.| ...:.:|..:.
  Rat   432 HMRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQAPRRNHRRCR-KPRRVVARYRY 495

  Fly   377 QQLDGANQQ------------QANPNPNA 393
            |::..||.|            :|.|.|::
  Rat   496 QEVVVANVQDGLINVEDRVEDRAGPLPDS 524

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	71/185 (38%)
		Cys-loop	185..199	CDD:349809	8/13 (62%)
		Neur_chan_memb	274..588	CDD:460753	48/136 (35%)
Gabrq	XP_063136356.1	None