Protein Alignment Rdl and exp-1

DIOPT Version :10

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: NP_495229.3
• Gene: exp-1 / 186801
• WormBaseID: WBGene00001373
• Length: 539
• Species: Caenorhabditis elegans
• Alignment Length: 398
• Identity: 117/398 - (29%)
• Similarity: 194/398 - (48%)
• Gaps: 54/398 - (13%)

  Fly    68 VSYDKRVRP-NYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKR--PGVET 129
            :.||.|..| |..|....|.|::.|.:|.::|||.||:.|:.::|:.|.||||.|.::  .....
 Worm   109 IQYDHRQVPENEKGEATYVEVSVVVSNIRAVSEVTMDYALELFYRESWRDPRLQYDRKLFKNKTE 173

  Fly   130 LSVGSEFIKNIWVPDTFFVN-------EKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPM 187
            |::...:...:|.||||..|       ::.|..|     ...:|:..:|.:..|.|:::...|.|
 Worm   174 LALHESYTNFLWFPDTFVPNAIASKNPQRNSISH-----RSLLRLDETGKLLYSRRISLVCECTM 233

  Fly   188 NLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTG 252
            :|..||.|:|||.:.|||:|||...:.|.|..|..:.....::.||.|.:......:...:..||
 Worm   234 DLTLFPFDKQLCKLGIESYGYTADHVVYKWSKGARTALELKKIRLPDFTIQEAYVTSQMESYATG 298

  Fly   253 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSST 317
            |||||.....|.||.|:..:|:.|||..:||.||||.|:.   |.......::.:|.:|.|:.|.
 Worm   299 NYSRLYVCFVFSRSSGFCFLQLIIPSTAVVITSWVSLWME---TETEFQDMISIILAITFLIFSY 360

  Fly   318 NAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGA 382
            |..:|::||:|::|:|||.||::||.||::.|.|.||.::|.:......:::::::...:|
 Worm   361 NEMMPRVSYIKAMDIYLGVCFMIVFLSLIKLALVKYMRQKIMLTSDSGNSLREMSQMSTRQ---- 421

  Fly   383 NQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEH-------------GHGHGHH 434
             :.:|....|.|....|            ||.:.:      ..||             .:|....
 Worm   422 -RLRARKTSNMNFRNNG------------GGSIPI------NEEHQQMLTVPNGEDKMANGDDKE 467

  Fly   435 AHSHGHPH 442
            |:::|..|
 Worm   468 ANNNGKSH 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	59/191 (31%)
		Cys-loop	185..199	CDD:349809	7/13 (54%)
		Neur_chan_memb	274..588	CDD:460753	48/182 (26%)
exp-1	NP_495229.3	LIC	103..515	CDD:455710	117/398 (29%)