Protein Alignment Rdl and glc-2

DIOPT Version :10

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: NP_491470.1
• Gene: glc-2 / 172103
• WormBaseID: WBGene00001592
• Length: 434
• Species: Caenorhabditis elegans
• Alignment Length: 344
• Identity: 135/344 - (39%)
• Similarity: 204/344 - (59%)
• Gaps: 25/344 - (7%)

  Fly    62 ILDSFSVSYDKRVRPNYGGPP--------VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPR 118
            ||::...:||.||||    ||        |.|.|.:.:..:|.:..|.|::::...||:.|.|||
 Worm    32 ILNALLKNYDMRVRP----PPANSSTEGAVNVRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPR 92

  Fly   119 LAYR-----KRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIR 178
            |||.     ..|...|:   ....|::|:|||||..||.::.|:....|.|:|::..|.|..|.|
 Worm    93 LAYENLGFYNPPAFLTV---PHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILYSSR 154

  Fly   179 LTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEV--ELPQFRVLGHR 241
            :::|:||||.||.:|:|.|.|:.::.|:.:||.||.|.| |..:.|.:...|  :||.|.:..:.
 Worm   155 ISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEW-DPSTPVQLKPGVGSDLPNFILKNYT 218

  Fly   242 QRATEINLT-TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVT 305
            ..|...:.| ||:|..|..::.|.|...|||:|:|.|:.:|||:||||||::.::|..|||||||
 Worm   219 TNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVT 283

  Fly   306 TVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQK 370
            |:|||||:.|:.||.||.:||||.:||:||.|...||.:|||||.|.|.....|..:.|..|.:|
 Worm   284 TLLTMTTMQSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVSYQDSVRQNDRSREKAARK 348

  Fly   371 IAEQKKQQLDGANQQQANP 389
             |::::::|:..:.:...|
 Worm   349 -AQRRREKLEMVDAEVYQP 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	65/190 (34%)
		Cys-loop	185..199	CDD:349809	8/13 (62%)
		Neur_chan_memb	274..588	CDD:460753	55/116 (47%)
glc-2	NP_491470.1	LIC	29..419	CDD:455710	135/344 (39%)