DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5280 and 1700088E04Rik

DIOPT Version :10

Sequence 1:NP_648278.1 Gene:CG5280 / 39033 FlyBaseID:FBgn0035952 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_613047.1 Gene:1700088E04Rik / 27660 MGIID:1920774 Length:216 Species:Mus musculus


Alignment Length:212 Identity:63/212 - (29%)
Similarity:109/212 - (51%) Gaps:20/212 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MWPSERIPPGGAG-AFHSAKVQ--YSKETADLIRLLVKESKMSMLVRKQIDESLRNGEPLPLPEP 99
            |...||:.....| .|...:.|  |:..|.:|:|:::||||::...::.|.::::.|.||||...
Mouse     1 MASQERVDSVTKGTGFRRCRKQAGYTPGTCELLRVMMKESKLTNFQQRHIMDTMKRGAPLPLQCN 65

  Fly   100 PRPNTNNDPDKETLA------ILDRARNAKRKNLRQ---IEASGAYKQSYYRPPADNRMHGEKAK 155
            |..:....|.|:..:      ||     |...:||.   .:|:|||.:..::|.|...:  ||.|
Mouse    66 PTSSLRGSPSKKAASAIYLPPIL-----ATHSHLRPASLCQANGAYSREQFKPQATRDL--EKEK 123

  Fly   156 SQLQFTMAGTHLPDPAIKPRRRPREEQLVTEEDLINELLDQINERAEWLTEMESMGQGKKYRPEI 220
            .:||...| |.......|.....|:|....|.|..:||:.:|.:|.|:|..||::|||::||..|
Mouse   124 RRLQNIFA-TGKDKEERKKVPHVRQEDPAPELDRFDELVKEIQDRKEFLAAMEALGQGRQYRSII 187

  Fly   221 RDQIAERLRRIQALESK 237
            ..:|:::||.::.::.:
Mouse   188 LAEISQKLREMEDIDRR 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5280NP_648278.1 UPF0193 38..246 CDD:461601 63/212 (30%)
1700088E04RikNP_613047.1 UPF0193 4..213 CDD:461601 62/209 (30%)

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