DRSC/TRiP Functional Genomics Resources

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Protein Alignment: GAPsec and plx

Sequence 1:NP_648245.2 Gene:GAPsec FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001163511.1 Gene:plx FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster

Alignment Length:400 Identity:83/400 (21%)
Similarity:144/400 (36%) Gaps:110/400 (28%)


  Fly    24 LKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSSN- 87
            |..:||.|..|..|....|.|               |.|.:.|...|.:...|..:|....:.| 
  Fly   838 LSPMRKPAKRGKRDAAELREL---------------WRTAIRQTIMLNRMETENAMLQARQNENE 887

  Fly    88 --RASVDGGD-----------------------GDKVDSGGVGLQDHPLSEG-PES----AWNTF 122
              |..:|..:                       |:|.|...:|   |.:..| |.|    .| ||
  Fly   888 LKRIKLDYEEIVPCDKQLIERWEQIIERNSTQIGNKKDPKVLG---HAIRTGVPRSKRGDVW-TF 948

  Fly   123 FNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLH---ERVVPAVLSSANVER 184
            ..:...:.....|.:|. |:.       :.|..:::....||...:.   .|..|    :....:
  Fly   949 LAEQHSMNTAPVDTKRF-PNF-------NTPYHMLLKHLTEHQHAIFIDLGRTFP----NHQFYK 1001

  Fly   185 KGLGMTKINLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMA 249
            ..||:.:::|.                       .:|..|:.|:|..||.||:..|.|.:  ::.
  Fly  1002 DPLGLGQLSLF-----------------------NLLKAYSILDPELGYCQGLGFICGVL--LLH 1041

  Fly   250 SDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMA--RLSNMLKSKDLSIYELL 312
            .|         ||:.|.....||.. |:...|.|.|.:   ||.:.  :||.::|.....:|..|
  Fly  1042 CD---------EANSFQLLKHLMFR-RNMRTKYLPDMK---KFQLQLYQLSRLVKDHLPDLYVWL 1093

  Fly   313 RSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDF 377
            ...::.|..|:..|:..:.|.:|||..|.|::|.:|.:..  |.:.|...:::.:.::.:|..| 
  Fly  1094 DQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESS--DVIFKFAIALLSVHKQQLLAKD- 1155

  Fly   378 ASNVKLLQNY 387
              |.:.:.:|
  Fly  1156 --NFEEIMDY 1163

Known Domains:


GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 41/184 (22%)
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 835..880 CDD:288663 14/57 (25%)
TBC 933..1152 CDD:214540 57/272 (21%)
RILP-like <1176..1267 CDD:304877
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C22232174
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR22957
RoundUp 00.000 Not matched by this tool.
22.030

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