DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG6683 and Coop

Sequence 1:NP_648232.1 Gene:CG6683 FlyBaseID:FBgn0035902 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001260776.1 Gene:Coop FlyBaseID:FBgn0263240 Length:358 Species:Drosophila melanogaster

Alignment Length:107 Identity:28/108 (26%)
Similarity:42/108 (39%) Gaps:11/108 (10%)


  Fly     7 RLIELVRANPKLYERELRNAPYEAHKKRHPEIWSSIATSLNSEASACVSRWNHLVAKQRRELAKE 71
            |||..|...|.|:   |||......:.....:|..:...:|..|..|..:|.||....|:...:.
  Fly    42 RLIAAVSRRPMLW---LRNNANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVYIRN 103

  Fly    72 K-AGGTGSDWSLLPHLKFLQHHHHPINHRNSGDLSRSTLKSS 112
            . :..|.|.|.....::|::    |..|.|   :.|.|..||
  Fly   104 NLSNETPSSWRFYNDMRFME----PAVHEN---IMRQTRSSS 138

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG6683NP_648232.1 MADF 7..94 CDD:214738 21/88 (24%)
CoopNP_001260776.1 MADF 42..124 CDD:214738 21/89 (24%)
BESS 320..353 CDD:281011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR12243
RoundUp 00.000 Not matched by this tool.
11.100

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