DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex2 and TED3

DIOPT Version :10

Sequence 1:NP_648210.1 Gene:Pex2 / 38941 FlyBaseID:FBgn0035876 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_565222.1 Gene:TED3 / 844320 AraportID:AT1G79810 Length:333 Species:Arabidopsis thaliana


Alignment Length:311 Identity:80/311 - (25%)
Similarity:138/311 - (44%) Gaps:53/311 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VPRVNQIDAIYLNKDIARLIRDNLLENLQAISPVLFIKIQPELDLIIQSAIWFGSVGKRCSTFGQ 71
            :.||||.||..|:.:::.::::.|::....:.|.:..:.:||||..::..||..|:.....|.|.
plant    37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGN 101

  Fly    72 QLLVLAYDAEK------------------LTVSRLVLHFILTVLPGYV----------KSW---E 105
            .|:.|.|..|:                  ||..:.:.:.:.:|...|:          :.|   |
plant   102 ALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSE 166

  Fly   106 ERRLTRRVEWFSEAIMWVENSALILNILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIGYK 170
            :|.|.||:....:.|..:..:|..||:|:   ||.|||...|::..|....:....:..|.:.::
plant   167 QRPLARRLWTLVQRIEGIYKAASFLNLLS---FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFE 228

  Fly   171 YLTRELLWGGFMEILGLVLPIINFRKLQRVLKSWT--FSGRRLEDRDGPAFLAPQMTLSTTCTFC 233
            |:.|:|:|..|.|:|.|:||::|...::.:|..:.  .|....||             :.||..|
plant   229 YMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKED-------------TVTCPIC 280

  Fly   234 GERPTLPH-HMGCGHIYCYYCLNANVLTDASFCCPNCGS---ACPESGIQS 280
            ...|.:|. .:.|.|.|||||:.....:.|||.|..|..   |....|:.|
plant   281 QVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSS 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex2NP_648210.1 Pex2_Pex12 22..207 CDD:398431 50/217 (23%)
RING-HC_PEX2 227..273 CDD:438189 17/49 (35%)
TED3NP_565222.1 Pex2_Pex12 49..242 CDD:398431 43/195 (22%)
RING-HC_PEX2 276..321 CDD:438189 17/44 (39%)

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