DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex2 and pex2

DIOPT Version :10

Sequence 1:NP_648210.1 Gene:Pex2 / 38941 FlyBaseID:FBgn0035876 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001410706.1 Gene:pex2 / 556228 ZFINID:ZDB-GENE-070530-2 Length:312 Species:Danio rerio


Alignment Length:304 Identity:96/304 - (31%)
Similarity:143/304 - (47%) Gaps:61/304 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VPRVNQIDAIYLNKDIARLIRDNLLENLQAISPVLFIKIQPELDLIIQSAIWFGSVGKRCSTFGQ 71
            |.|::|:||..|:..:.:|:.....:..|...|.:...::|||..::|..:|..::....:|.||
Zfish    21 VLRISQLDAFELDGALEQLVWSQFTQCFQHFKPGILTPVEPELKALLQLLLWRFTIYSNSATVGQ 85

  Fly    72 QLLVLAYDAEKLTVSRLVLHFILTVLPGY--------VKSWEERRLTRRVEWFSEAIMWVENSAL 128
            .||.:.|..              .::||.        .|.| ...||...:||.|     .:.:|
Zfish    86 SLLNIRYKN--------------ALIPGQKYRPMSRPQKFW-FALLTVGEKWFRE-----RSHSL 130

  Fly   129 ILN-------------------------ILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIG 168
            .||                         ::|:..||:.|..|||.:.|||:..:..|....|||.
Zfish   131 FLNHPAESNARKARKVLSILLGLTKAASLVNFLLFLQRGTFPTLTERLLGVQPVFSRPQGPRDIN 195

  Fly   169 YKYLTRELLWGGFMEILGLVLPIINFRKLQRVLKSWTFSGRRLEDRDGPAFLAPQMTLSTTCTFC 233
            ::||.|||||.||.|.|..:||:||..||:..: |..||  .|.|..|..  :.:.|..|.|..|
Zfish   196 FQYLNRELLWHGFAEFLIFLLPLINVWKLKAGV-SALFS--PLSDLTGTQ--SSEETHLTECAIC 255

  Fly   234 GERPTLPHHMGCGHIYCYYCLNANVLTDASFCCPNCGSACPESG 277
            ||.||:||.:||.|::||||:.:||:.|..|.||.||:   |:|
Zfish   256 GEWPTMPHSIGCKHVFCYYCVKSNVIADIYFTCPKCGA---ETG 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex2NP_648210.1 Pex2_Pex12 22..207 CDD:398431 58/217 (27%)
RING-HC_PEX2 227..273 CDD:438189 24/45 (53%)
pex2NP_001410706.1 Pex2_Pex12 33..225 CDD:398431 56/211 (27%)
RING-HC_PEX2 249..294 CDD:438189 24/47 (51%)

Return to query results.
Submit another query.