DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and Secisbp2

DIOPT Version :9

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_083555.1 Gene:Secisbp2 / 75420 MGIID:1922670 Length:858 Species:Mus musculus


Alignment Length:318 Identity:86/318 - (27%)
Similarity:141/318 - (44%) Gaps:39/318 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KNQHRKREQQTS--------LLDFVIKPRPKTQRQTKAHKLQKTHLAITRGSYIVYKPKGKTRLD 84
            :.||....:.:|        .:..:.|....::|..::.:::..|..:...:.::  .|||.|..
Mouse   464 QQQHASHAKPSSRPVVFSVGAVPVLSKDASSSERGRRSSQMKTPHNPLDSSAPLM--KKGKQREI 526

  Fly    85 PK-KKITRLKKSVRVYRTSKKAER--------EVAENDLEGVPVVGQDINPNA-IPLEQQVQNLS 139
            || ||.|.|||.:...|..:..:|        .||.:|.:.|.....:..|:. .|...:....|
Mouse   527 PKAKKPTSLKKIILKERQERMQQRLQESAVSLTVASDDSQDVESGASNQTPSQDNPTGPEKTEES 591

  Fly   140 LSKTPAPNNPSQ-------------------AKTVHAIHSRRFRSYCDNCTRPRLKELSTQLLRD 185
            :|.||.....|:                   :.|...|||||||.||.......:....|.||::
Mouse   592 VSSTPVVEGESEEPAGTEFQRDPEACQPAPDSATFPKIHSRRFRDYCSQMLSKEVDACVTGLLKE 656

  Fly   186 LDRFQKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLATDCEICPGESGLDATIEGLKF 250
            |.|||.|.:.|:.:||:...|||||:||.|..|::.|:|.:.::.:||....:.|||.|:..:..
Mouse   657 LVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLRKLKCIIISPNCEKTQSKGGLDDTLHTIID 721

  Fly   251 QCQQQQVPYCFPLLRRELSYALQKRAQICCVAILDFDGANATYADLLNEIEDARAEYK 308
            ...:|.:|:.|.|.|:.|..:|.|...:..|.|..:|||...:..::.....||..||
Mouse   722 CACEQNIPFVFALNRKALGRSLNKAVPVSIVGIFSYDGAQDQFHKMVELTMAARQAYK 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:279573 31/89 (35%)
Secisbp2NP_083555.1 Ribosomal_L7Ae 662..762 CDD:279573 34/99 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845787
Domainoid 1 1.000 66 1.000 Domainoid score I9896
eggNOG 1 0.900 - - E1_28N3Y
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8073
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007151
OrthoInspector 1 1.000 - - otm43423
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5622
SonicParanoid 1 1.000 - - X6030
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.720

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