DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and Secisbp2

DIOPT Version :10

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_083555.1 Gene:Secisbp2 / 75420 MGIID:1922670 Length:858 Species:Mus musculus


Alignment Length:318 Identity:86/318 - (27%)
Similarity:141/318 - (44%) Gaps:39/318 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KNQHRKREQQTS--------LLDFVIKPRPKTQRQTKAHKLQKTHLAITRGSYIVYKPKGKTRLD 84
            :.||....:.:|        .:..:.|....::|..::.:::..|..:...:.::  .|||.|..
Mouse   464 QQQHASHAKPSSRPVVFSVGAVPVLSKDASSSERGRRSSQMKTPHNPLDSSAPLM--KKGKQREI 526

  Fly    85 PK-KKITRLKKSVRVYRTSKKAER--------EVAENDLEGVPVVGQDINPNA-IPLEQQVQNLS 139
            || ||.|.|||.:...|..:..:|        .||.:|.:.|.....:..|:. .|...:....|
Mouse   527 PKAKKPTSLKKIILKERQERMQQRLQESAVSLTVASDDSQDVESGASNQTPSQDNPTGPEKTEES 591

  Fly   140 LSKTPAPNNPSQ-------------------AKTVHAIHSRRFRSYCDNCTRPRLKELSTQLLRD 185
            :|.||.....|:                   :.|...|||||||.||.......:....|.||::
Mouse   592 VSSTPVVEGESEEPAGTEFQRDPEACQPAPDSATFPKIHSRRFRDYCSQMLSKEVDACVTGLLKE 656

  Fly   186 LDRFQKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLATDCEICPGESGLDATIEGLKF 250
            |.|||.|.:.|:.:||:...|||||:||.|..|::.|:|.:.::.:||....:.|||.|:..:..
Mouse   657 LVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLRKLKCIIISPNCEKTQSKGGLDDTLHTIID 721

  Fly   251 QCQQQQVPYCFPLLRRELSYALQKRAQICCVAILDFDGANATYADLLNEIEDARAEYK 308
            ...:|.:|:.|.|.|:.|..:|.|...:..|.|..:|||...:..::.....||..||
Mouse   722 CACEQNIPFVFALNRKALGRSLNKAVPVSIVGIFSYDGAQDQFHKMVELTMAARQAYK 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:426153 31/89 (35%)
Secisbp2NP_083555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..261
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..296
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..625 31/162 (19%)
Nuclear localization signal. /evidence=ECO:0000255 380..387
Ribosomal_L7Ae 662..762 CDD:426153 34/99 (34%)
RNA-binding. /evidence=ECO:0000255 678..699 10/20 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 785..819
Blue background indicates that the domain is not in the aligned region.

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