DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and cks2

DIOPT Version :9

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001016170.1 Gene:cks2 / 548924 XenbaseID:XB-GENE-922081 Length:79 Species:Xenopus tropicalis


Alignment Length:62 Identity:10/62 - (16%)
Similarity:27/62 - (43%) Gaps:14/62 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSKYKNQHRKREQQTSLLDFVIKPRPKTQRQTKAHKLQK---THLAITRG----SYIVYKPK 78
            |.||.:::.:...       |:.|:...::..|.|.:.:   ..|.:.:.    .|::::|:
 Frog     9 SDKYSDENYEYRH-------VMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPE 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:279573
cks2NP_001016170.1 CKS 8..73 CDD:279455 10/62 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9795
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007151
OrthoInspector 1 1.000 - - otm48570
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6030
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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