DRSC/TRiP Functional Genomics Resources

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Protein Alignment ERR and nhr-273

DIOPT Version :10

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_494784.1 Gene:nhr-273 / 188451 WormBaseID:WBGene00020460 Length:378 Species:Caenorhabditis elegans


Alignment Length:396 Identity:81/396 - (20%)
Similarity:141/396 - (35%) Gaps:131/396 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RDELRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRF 184
            :|:.:..|.:|.:...|||:|..:|.||.|||:|::..:..|.|..||:|::....|..|:|||:
 Worm     6 KDKDQSKCSICREPGDGFHFGAEACRACAAFFRRSVSQSKTYLCQGNNDCDVTVNIRCMCRACRY 70

  Fly   185 QKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTT------------------- 230
            .||:.:||...||         |:..|.|.:....::.||....|:                   
 Worm    71 VKCIEVGMNPVGV---------QQKPRLPKNRKEVSIDLLSSPRTSNSLMLELPLTGQMPILSKI 126

  Fly   231 -----SLCDVKIL-------EVLNSYEPDALSVQTPPPQ-VHTTSITND---------------- 266
                 ::|:.:|.       .|.....|.|::.:....| :...::.:|                
 Worm   127 RASYQTMCNARIALHKAEDKTVFEKRTPKAVNYKEAVKQGMKDVTLASDWVSWSFDEFSNLPIDQ 191

  Fly   267 ---------------EASSSSGSIKLESSVVTPNGTCI-------FQNNNNND----PNEILSVL 305
                           |:..||.......::..|:|..|       |.|..::|    ..:|..:.
 Worm   192 KRILFHNSYTAFFIMESGFSSHLNNTPDAITFPSGDYIDTNDLNSFYNGTDSDKQISSEDINRLF 256

  Fly   306 SDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMD 370
            ...|::...|||           ||    |..||:...|.|.|              |...:|  
 Worm   257 KPSYERFKKSVI-----------LP----MMTLQMDIIEYLAL--------------FTMLLW-- 290

  Fly   371 EHLAKECGYTEFYYHCVQIAQRMERISPRREEYY----------LLKALLLANCDILLDDQSSLR 425
                 :.|..|....|::|..:::....:..::|          |::...|.|  ||.|...|:|
 Worm   291 -----DTGLIELSDECIKIGDKIKTQVLKELDFYMRNVKKVEEPLVRIGTLVN--ILPDVHKSVR 348

  Fly   426 AFRDTI 431
            ..:|.:
 Worm   349 RIQDDL 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 33/95 (35%)
NR_LBD 237..493 CDD:472173 44/255 (17%)
nhr-273NP_494784.1 ZnF_C4 12..80 CDD:197701 27/67 (40%)
Hormone_recep 150..347 CDD:459675 39/234 (17%)

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